Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2410 ATGATCATGGAATCTCCAGAACCTTCGAAGAACAATGCAACTTCTTCGGCCTCCACAATCAATGCCGTCGCCATCAATGACTCCCCTCAAGTTCAAGAATCACCCTTTTTCAGGTTTGTAAACAACTTATCTCCTATAAAGCAACCTGCCAAGGCTTCTCATGTGGCACAAGGCTTCGTTGGACTCAATTCTCCGCCTCTTGTATTCACATCACCGCGTATTAGTTGTCACCGTGAAACACACTTATTGGAAAGACCTTCAGGTGCTCAGTCATCAAGTCGATCAGAATCTCAAAGTGACAATAGAGGCAAGTTAATTGAAGCTCCTGGGGATTCTGCGAAATCAACTGCTGAACTGCCACTTGCAGGGGAGTTTATAACTGAAACTGTGAAGGATTTTGATGTCAAAAATGATGCAACTACCCAACACTGCAGTCCGCCGCCATCTGTTGATAAATATCTGGTTGATCCTGTGGATATTGATCAAATGTACTCTGTCAACCCAGATGAGAAACAATCTAATGATACTGAATCATCTCTGAGTAACTTAGCTCAATCAAAGAAAAGCATATCAGAAGTTGACAGCAAAGATGATCCTTGTGATAAAGCAGATAAACCTTTGATTTTGTTAGAGAAAGTTGATAAGGCTCAAACAGGGCCAGCATATGTTGAAGGGCATGATCAAGTAACAGGGGAGAAAAATGATGTTTTAATGGCTTTGCACAAGCGCATGAAGGATGATAATGACTGTACATCTCAGTTGCTTCCCGAACAGAATCTGCAGGATGTTAAAGATTGGGAAGATTGCGATGAGATGGTGTCAACCTCACATGTAGGTGCTGAGAACGTGTCACAAGATGCTTCTGAGGTTACTCTAAAGCATCATGGCCTTCGTAGACGGTGTCTACAATTTGAGGAGGCTGCATCTAATGCTCGTGGAAGTGATAAATCTTGTATGAAATCAAATGCAGCTCCAATCAAAATAAAAATGGTCAAGCTGTCTGAACCTGGCACTTCTTCCTTGTTTCCTCAAAGATGTAGTGGAAACTCAACTGTGACATGTCCCAAGCCATCAGGCATTGGATTGCATTTAAATAGCATTGTAAATGCTATGCCTCCTGGTTGTGCTGCAACTACAGGTATTAGATCATCAGATTGTTTACAAGGGAAGAAATCTGCATTGATTAGTATAAATAAAGTGGAGAACATGAAGGGACGCCTAACTTCATCAAATATAGATGGGCAATCATTAATTGATAGTGGAAATGAGAGCCAAGCCAACATTTCCTCACTACCTGTAGATTCTTTCATTTCTGGGTCTCATAGCCCTACAGAACCTGTTGCTATATGTCCTGAAAGTCTCCATGATAAGAGGAAACTAAGCCCTACAGGTGACGGATATCCTGAGGAATCAAAGCAACCTAGCCCGAGCAAGAAAAAGAAGAGAGCATCAAGCAACAATGATGATAATGGCTGTAAAAGGTGCAACTGTAAAAAGAGTAAATGTTTGAAACTTTATTGTGATTGTTTTGCTGCTGGAATCTATTGCGCTGATGATTGTTCTTGCCAAAGCTGCTTGAATAGACCAGAGTATGAAAATAAAGTTATTGAAACAAGGAAACAAATTGAATCCCGTAATCCTCTTGCATTTCTTCCCAAGATTGTCCCTCAATCCACTGATCGTCCATCAAATAATATGGAGGATGCAATTCTGATGACACCTTCATCAGCCAGGCACAAAAGAGGTTGCAATTGCAAAAGGTCAATGTGTCAGAAAAAATATTGTGAATGTTATCAGGCTGGTGTCGGATGCTCTAGCGGATGCCGATGTGAGGGATGTAAGAATGTTTATGGCACAAAAGAAGATTATGTTGCAAGGGATCATGTTTTCAATAAAGAAAGGATGGGTAGCAGGATTGAAAATGAACCAGATGGTGCTTTTCTCAACAAACTGGAAATGGTGGCAAGCAAGTCAGATTTGTTCCATGTCTCACCTATAACGCCATCATTGCAATGCTCTGACCAAGGAAAGGAGGCTGCAAAATTCGGACTTCATTCTGGACAGCATCTACCCTCCTCTGAAACTAATGTTGATATGCTTCCCTCAAGTGCAAATTATAACAAGTCTCTGGAGAACTCGCAGAGTGTTCTTGCAAACCTGGAAACAGATGAGATGTTGGAAACTGCTTCCTATGATTGGCAAGTGGATTGCAGCGATGTAATGGATCAATCATCACCATGTGATTTGGTTGCTAACATACTTCAGGATACTCCCTTGTCAAATCCTGAATCAATGTCAAGTGCTTCACTGTTCACATCTAGTACAAAGGAGTGCGGAAACATTCCTCTATCCCAATCACAAGGACGCATTCGCCTAATATCCGGGAGCTCTCTTCGTTGGCGTGGTTCACCAAATACCCCAAGGGCTAGATTAGGTGTAAAACACCTTCAGTCTCTTGATTCTGAAAGCAGACTCTTCGACATAATGGAAGATGAAACACCAGATGTATTGAAGGAAGGTTTAACACCCACCAAGTCTGTGAAAGCAAATTCCCCAAACCAGAAGCAAGTTTCTCCTCCCCATAGTCGTCTACGCGGACTTGGTTCAAGCTCCTCTGGAGGCTTCAGAACTGGCAGGAAATTTATACTGAAATCTGTTCCTTCCTTTCCCCCATTGACACCTTGTGTTGAATCCAGAGATAATAGCAGTGAAGACTTAGGTAACAATGCCAAGTAA 2736 0.4185 MIMESPEPSKNNATSSASTINAVAINDSPQVQESPFFRFVNNLSPIKQPAKASHVAQGFVGLNSPPLVFTSPRISCHRETHLLERPSGAQSSSRSESQSDNRGKLIEAPGDSAKSTAELPLAGEFITETVKDFDVKNDATTQHCSPPPSVDKYLVDPVDIDQMYSVNPDEKQSNDTESSLSNLAQSKKSISEVDSKDDPCDKADKPLILLEKVDKAQTGPAYVEGHDQVTGEKNDVLMALHKRMKDDNDCTSQLLPEQNLQDVKDWEDCDEMVSTSHVGAENVSQDASEVTLKHHGLRRRCLQFEEAASNARGSDKSCMKSNAAPIKIKMVKLSEPGTSSLFPQRCSGNSTVTCPKPSGIGLHLNSIVNAMPPGCAATTGIRSSDCLQGKKSALISINKVENMKGRLTSSNIDGQSLIDSGNESQANISSLPVDSFISGSHSPTEPVAICPESLHDKRKLSPTGDGYPEESKQPSPSKKKKRASSNNDDNGCKRCNCKKSKCLKLYCDCFAAGIYCADDCSCQSCLNRPEYENKVIETRKQIESRNPLAFLPKIVPQSTDRPSNNMEDAILMTPSSARHKRGCNCKRSMCQKKYCECYQAGVGCSSGCRCEGCKNVYGTKEDYVARDHVFNKERMGSRIENEPDGAFLNKLEMVASKSDLFHVSPITPSLQCSDQGKEAAKFGLHSGQHLPSSETNVDMLPSSANYNKSLENSQSVLANLETDEMLETASYDWQVDCSDVMDQSSPCDLVANILQDTPLSNPESMSSASLFTSSTKECGNIPLSQSQGRIRLISGSSLRWRGSPNTPRARLGVKHLQSLDSESRLFDIMEDETPDVLKEGLTPTKSVKANSPNQKQVSPPHSRLRGLGSSSSGGFRTGRKFILKSVPSFPPLTPCVESRDNSSEDLGNNAK* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2410 911 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 3 904 - -
Ahy6g2410 911 MobiDBLite consensus disorder prediction 451 490 - -
Ahy6g2410 911 MobiDBLite consensus disorder prediction 85 99 - -
Ahy6g2410 911 MobiDBLite consensus disorder prediction 451 465 - -
Ahy6g2410 911 MobiDBLite consensus disorder prediction 895 911 - -
Ahy6g2410 911 MobiDBLite consensus disorder prediction 472 490 - -
Ahy6g2410 911 MobiDBLite consensus disorder prediction 165 202 - -
Ahy6g2410 911 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 3 904 IPR044522 GO:0003700
Ahy6g2410 911 MobiDBLite consensus disorder prediction 166 189 - -
Ahy6g2410 911 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 493 528 IPR005172 -
Ahy6g2410 911 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 581 615 IPR005172 -
Ahy6g2410 911 MobiDBLite consensus disorder prediction 83 119 - -
Ahy6g2410 911 MobiDBLite consensus disorder prediction 844 876 - -
Ahy6g2410 911 ProSiteProfiles CRC domain profile. 491 618 IPR005172 -
Ahy6g2410 911 MobiDBLite consensus disorder prediction 841 911 - -
Ahy6g2410 911 SMART CXC_2 578 619 IPR033467 -
Ahy6g2410 911 SMART CXC_2 490 531 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2410 Ahy-Chr6 108479353 108485504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2410 817 894 CPP Transcription Factor Family AT3G22780 41.667 6.13e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Ahy6g2410 TCR 8.40E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2410 K21776 - gmx:547664 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3100 16 146827929 146833955 Ahy6g2410 6 108479353 108485504 hybridization
Ahy6g2410 6 108479353 108485504 Ahy17g1756 17 43480973 43484802 PCT
Ahy6g2410 6 108479353 108485504 Ahy10g1501 10 85787967 85790914 PCT