Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2409 ATGGCAAAGAAGAAGAATCCCCACGTGTATATGGATGTTTCTATAGACGGAGATCCAGTTGAGAGGATGGTTTTCGAGCTCTTCTATGACATTGCTCCAAAGACTGCAGAAAATTTTCGTGCACTGTGTACAGGAGAAAAAGGAGTTAGCCCAAATACTGGGAAATCACTACACTACAAGGGTTCTTTCTTCCATTACATTCTGAAAGGCTCTATTGTGCGGGGTGGCGATTTTGTCAATCGAAACGGGACTGGTGGGGAAAGCATATATGGTTCAAAGTTTCCAGATGAGTCACCTAGGCTGAAGCATGATTCTTCGGGCCTTCTATCAATGGCAATTGCTGATCGCGAAACACTGGGTTCTCATTTTATCATCACTTTAAAAGCGGATCACCATCTTGATAGAAAGCATGTAGTCTTTGGCAAGCTTGTCCACGGGCATAATGTGTTGAAGAAAATTGAAGACACAGGTGATGAAGAAGGGCATCCAACTGTGACCGTTAAAATAATTAATTGTGGTGAATTCAATGACGATGGAAAGAAGATAAATAAATCTGAAGCCAATAGTCAAGAAGTGCAGCGTAAGGGAAAGCACAAAAAATCTTCAAGAGACCGAAGAAAAAGGAGAAAATACTCCTCATCAGATTCTGAGAGTTCTGATTCGGACATGGAATCTTCGGAAAGTGATAGTGATTCTGAGTCGGATGGTTCTTCATCATCTTATGTAAGTTCCTCTAGTGATGACAGGCGAAGGAAGAGAAAGAGGTCTTCGAGGAAGGATAAACATAGACGTGGAAAGCGAAGAGATAAACGCCGAGATAAGAGGCGCAGGAAGCGTGACAAGAAGTCAAAACGTAGATCGAAACGGGATTCTGGTAGTCTAACTGATTCGGATAGTGGAACTAAGAGTGGCAATAGCCCTGATAGCAGAAGTCAAGCTGATGGGAAAGATCTGAAGCATAAAGATCATGGGCAGAAAAATGCTGAAGATCAGTCTCCATTAAATGTGGAGAATGAATTGCCTCTTGCACATCGGAAAAAGCGGGAGGAACTGGATATGCCAGAGGAAGAATTTCCGAAGGAGAATGGAGCACGGCGCAGCAATGGCATAGGAACCAACCATCGATCTGACAGAAGTGAAGAAAGGCAACCTGATGTGGTTGATGATCATCCAGGGAAATCTAGGAGTCGAAGCATGAGTCCTAAGCGAGCTGTGAGTAAGAGTATGAGTATTAGTCCCAGGGGTGGAAAAAGAAGCCCAAGCCCAAGTCCAAGTCCAGACAGGAGTTTGAGCAGAAGTCCAAGTCGTAGTAGAAGCCCTCCTGCTCCATCAAGGCGGAGTTTGAGCAGGAGTCCTGCTAGAAGCATAAGCAGAAGTCCTGTTAGAAGGACAAGCAGAAGTCCAGACCGAAGCATCATTAGAAGCCCAGTGAGGGGTAGGAAGGGGAGAAGTGTCAGCAGAAGCCCCATGAGAACTCGCAATCATAGAAGTATCAGTAGAAGCTCTGGGAGAATCCGTGATCGCAGTGTTAGTAGAAGTCCTGTGAGAGCCCGTGATCGCAGAAGTATCAGTAGAAGCCCTGTGAGAGCTCGTGATCGTGGAAGTGTCAGCCGAAGCCCTGTGAGATCCCATTCTCGCAGTCATCGGAGCAGGAGTTCTCCCAGACCACCATCAAGAAGAACAATCAGTAGGAGCCCTGTGCGAGTGTCAAGAAAGAGCATAAGCCGAAGTCCAGTTAGGTCCTCTGCCAGAAGCTTGAGTAGAAGCTCTGGGAGGGTTCCTTTGAGAAGCATTAGTAGAAGCCCTGTCAGAGCCCCAAGTAGAAGTGATCGCCGCAGCTATTCTAGGAGTCGCAGCCCTGTCCGTAGGACAAGGACACCTCGTGGTAGGAGCATTTCGAGAAGCGTCTCACCTGATGCTTCACCAAAGCGTATCAGAAGGGGAAGAGGTTTTAGTGAACGATATTCTTATGCCAGAAGGTATAGAACCCCTTCTCGTTCTCCTGTGAGGTCATACCGCTACAATGGAAGAAGTGACCGTGACAGATACACAAGTTATAGGAGGTATTCCCCCAGGCGATACAGGAGCCCACCACCACGTGCAAGATCTCCTCCAAGATACCGAGGCAGGAGGAGCAGGACACCTTTATCATGCAGCCCTCGTTATCGCAGTCGAAGATATAGCAGAAGCCGTAGCCCTGTTCGTAGCCGTTCACCAGTTGAACCATATCGAGCTCGTGTCTCTCCTCGTGCAGAGAGGCGCATGTCCTCATCTCGGAGCAGGAGTCCGTCACGATCGAGGTCTTCTGTAGAATCACAATCTCCACGAAAAGCAAGCGGAGTCAACAGGTCAAGGTCGTCATCCGGAAGCCCAAATGGAAAGAAAGGCCTAGTCTCGTATGAAGATGGTTCTCCTGACTCAAGCCCGAGGTAA 2433 0.4755 MAKKKNPHVYMDVSIDGDPVERMVFELFYDIAPKTAENFRALCTGEKGVSPNTGKSLHYKGSFFHYILKGSIVRGGDFVNRNGTGGESIYGSKFPDESPRLKHDSSGLLSMAIADRETLGSHFIITLKADHHLDRKHVVFGKLVHGHNVLKKIEDTGDEEGHPTVTVKIINCGEFNDDGKKINKSEANSQEVQRKGKHKKSSRDRRKRRKYSSSDSESSDSDMESSESDSDSESDGSSSSYVSSSSDDRRRKRKRSSRKDKHRRGKRRDKRRDKRRRKRDKKSKRRSKRDSGSLTDSDSGTKSGNSPDSRSQADGKDLKHKDHGQKNAEDQSPLNVENELPLAHRKKREELDMPEEEFPKENGARRSNGIGTNHRSDRSEERQPDVVDDHPGKSRSRSMSPKRAVSKSMSISPRGGKRSPSPSPSPDRSLSRSPSRSRSPPAPSRRSLSRSPARSISRSPVRRTSRSPDRSIIRSPVRGRKGRSVSRSPMRTRNHRSISRSSGRIRDRSVSRSPVRARDRRSISRSPVRARDRGSVSRSPVRSHSRSHRSRSSPRPPSRRTISRSPVRVSRKSISRSPVRSSARSLSRSSGRVPLRSISRSPVRAPSRSDRRSYSRSRSPVRRTRTPRGRSISRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYTSYRRYSPRRYRSPPPRARSPPRYRGRRSRTPLSCSPRYRSRRYSRSRSPVRSRSPVEPYRARVSPRAERRMSSSRSRSPSRSRSSVESQSPRKASGVNRSRSSSGSPNGKKGLVSYEDGSPDSSPR* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2409 810 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Ahy6g2409 810 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 1 330 - -
Ahy6g2409 810 MobiDBLite consensus disorder prediction 673 688 - -
Ahy6g2409 810 MobiDBLite consensus disorder prediction 176 197 - -
Ahy6g2409 810 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Ahy6g2409 810 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Ahy6g2409 810 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Ahy6g2409 810 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Ahy6g2409 810 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Ahy6g2409 810 MobiDBLite consensus disorder prediction 340 363 - -
Ahy6g2409 810 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 330 - -
Ahy6g2409 810 SUPERFAMILY Cyclophilin-like 4 178 IPR029000 -
Ahy6g2409 810 MobiDBLite consensus disorder prediction 296 311 - -
Ahy6g2409 810 MobiDBLite consensus disorder prediction 640 660 - -
Ahy6g2409 810 MobiDBLite consensus disorder prediction 556 596 - -
Ahy6g2409 810 MobiDBLite consensus disorder prediction 371 396 - -
Ahy6g2409 810 MobiDBLite consensus disorder prediction 176 810 - -
Ahy6g2409 810 MobiDBLite consensus disorder prediction 480 499 - -
Ahy6g2409 810 MobiDBLite consensus disorder prediction 399 462 - -
Ahy6g2409 810 Gene3D - 1 176 IPR029000 -
Ahy6g2409 810 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Ahy6g2409 810 MobiDBLite consensus disorder prediction 500 539 - -
Ahy6g2409 810 MobiDBLite consensus disorder prediction 312 328 - -
Ahy6g2409 810 MobiDBLite consensus disorder prediction 251 286 - -
Ahy6g2409 810 MobiDBLite consensus disorder prediction 761 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2409 Ahy-Chr6 108468985 108477407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2409 25 175 U-box Gene Family AT5G67530 38.562 1.68e-19 91.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3099 16 146816007 146824311 Ahy6g2409 6 108468985 108477407 hybridization