Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2408 ATGGGAGTGAAGGGCATGTTATTTGTTATTGTTGCCTTGGTCCTTGTAGAAGTAGAAGTAGAAGTAGTAGCTATAGATGATATTGACAGTACTCAAATAGCTCTTCATGGGTGCCAAAGGAATTGTGGAGATGTTCAAATTCCGTATCCATTTGGCATAGGAAAAACCGAAAACGGTACTACCTGTTTCTTAGACAAACCATTTAATCTTACTTGCAACAGTAGTAGTTCCAGTTTAACATCGGGCAATGTCCAAGTTATAAACATCAACATCTCCCAAGGTCAAGCAGATATGTTGATTTTTGTCTCCAAATATTGTTATAATAGTAGCTATGGTAACAACGCTGTAAGTAGCCAACCCAGCGGGCTCATAAGTAGTTCTTCTTTCACCATTTCGAGCAAAGACAACAAGTTCATAAGTGTTGGCTGCGATACTTACGGCTATCTTAATAGCTTCTACAACAACAATGCAGGTTATTCAACAGGGTGCTTAACAAGATGTTATGGCAACACTAAGGAAATCAAGGATGGAGATTGTTCCGGTATTGGGTGCTGTGAGGTGGATATTCCTCCCAAGATGAGATCGGTCTCAACTCAAGCAGGTACCTTTTTCAATTTCCAGGATTCTCTGGTCTTCAACAACTGTAGCTATTCCTTTGTTGTCAAGAATGGCAACTACACGTTTAAGAAGGCCCACTTGGAGAATCTACCATATGAGATGCTCCCTGTGGTGTTCAATTGGAGTGTTGGAAACGAAACATGTAAAAAATCACTCAACAGAGGTACCAACGCTTGCAAGGGAAATAGTACTTGTGTGGATGCAGAGAGTGGACACGGTTACCGGTGTCAATGCAAGCAAGGTTTTGAAGGAAATCCATACCATCCGCATGGTTGCACAGACACTGATGAATGCAAGACAGGACAACATTCATGTGTAAGTGACCATAATTGTCACAATACAAATGGATCCTACATATGCTTCTGTCCTAAGGGGCAATCTGGAAATGGTACCAAGGAAGATGGTTGCCTGAAGAAAAATTTCCTTCTACGTATTGTCATTGGGGCTAGTGCAGGATTTATAACTATTTTGGTGGGGACTTGTTTGTTATACCTGACGTATCAAAAGAGAAAACTCATCAAACTAAAAGAGAAGTTTTTTGAGCAAAACGGTGGTCTTATTTTGCTACAACAAGGAGAAGAGTCCTCCCATACTAAAATTTTCACCGCTGACAAATTGAAGAAAGCCACCAACAACTATGACGAGAATTTAATCATTGGCAGGGGAGGTTATGGCACAGTTTTCAAAGGAGTTCTGGAAAATAAAACAATTGTTGCTATCAAGAAGTCCAAATTTAGTAAGATATTTTGA 1368 0.3999 MGVKGMLFVIVALVLVEVEVEVVAIDDIDSTQIALHGCQRNCGDVQIPYPFGIGKTENGTTCFLDKPFNLTCNSSSSSLTSGNVQVININISQGQADMLIFVSKYCYNSSYGNNAVSSQPSGLISSSSFTISSKDNKFISVGCDTYGYLNSFYNNNAGYSTGCLTRCYGNTKEIKDGDCSGIGCCEVDIPPKMRSVSTQAGTFFNFQDSLVFNNCSYSFVVKNGNYTFKKAHLENLPYEMLPVVFNWSVGNETCKKSLNRGTNACKGNSTCVDAESGHGYRCQCKQGFEGNPYHPHGCTDTDECKTGQHSCVSDHNCHNTNGSYICFCPKGQSGNGTKEDGCLKKNFLLRIVIGASAGFITILVGTCLLYLTYQKRKLIKLKEKFFEQNGGLILLQQGEESSHTKIFTADKLKKATNNYDENLIIGRGGYGTVFKGVLENKTIVAIKKSKFSKIF* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2408 455 Gene3D Laminin 305 344 - -
Ahy6g2408 455 ProSitePatterns Protein kinases ATP-binding region signature. 425 448 IPR017441 GO:0005524
Ahy6g2408 455 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 317 328 IPR000152 -
Ahy6g2408 455 ProSiteProfiles EGF-like domain profile. 300 343 IPR000742 -
Ahy6g2408 455 SMART egf_5 303 343 IPR000742 -
Ahy6g2408 455 SMART egf_5 253 299 IPR000742 -
Ahy6g2408 455 Gene3D Phosphorylase Kinase; domain 1 395 454 - -
Ahy6g2408 455 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 450 IPR045274 GO:0007166
Ahy6g2408 455 ProSiteProfiles EGF-like domain profile. 257 299 IPR000742 -
Ahy6g2408 455 ProSitePatterns Calcium-binding EGF-like domain signature. 300 326 IPR018097 GO:0005509
Ahy6g2408 455 CDD EGF_CA 300 334 - -
Ahy6g2408 455 SMART egfca_6 300 343 IPR001881 GO:0005509
Ahy6g2408 455 Gene3D Laminin 251 304 - -
Ahy6g2408 455 SUPERFAMILY EGF/Laminin 298 335 - -
Ahy6g2408 455 Pfam Calcium-binding EGF domain 300 342 IPR001881 GO:0005509
Ahy6g2408 455 Pfam Wall-associated receptor kinase galacturonan-binding 38 94 IPR025287 GO:0030247
Ahy6g2408 455 SUPERFAMILY Protein kinase-like (PK-like) 401 450 IPR011009 -
Ahy6g2408 455 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 18 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2408 Ahy-Chr6 108445477 108448176 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2408 38 451 Receptor kinase-like Gene Family AT1G21230 39.631 3.52e-86 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2408 - - ahf:112697467 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy6g2408 6 108445477 108448176 Ahy17g2741 17 125627837 125631593 PCT
Ahy6g2408 6 108445477 108448176 Ahy8g0483 8 9700574 9704027 PCT