Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2406 ATGGAACTAAAGGTCATGATGCTAATTGTTGCACTAGTCCCTCTTGGAGTTGTAGCTGCAAATCGTGACCATAATCAAGCTCTTGATGGGTGCCAAAGAGAGTGTGGAGGTGTTCAAATTCCATATCCATTTGGAATTGGAAAATCAAACACAACCGGCGAGAATTGTTCCATGGACGAACCATTCGAACTCACTTGCGAAGAACAAGATTCCATTTTGAAATCCGGAGATTTCCAAGTCACATCCATAAACATCACCAAAGGCCAAGTTGAAATGATGGCACCAGTTTCCAAATCTTGCAGAGACACAAGCAGTGACGAAACAACGTACCTCGTCACTTTTCCTTCTTTCACGGTTTCTAGAAACGACAACAAATTCGTTAGTGTCGGTTGCGACACTTTCGGCTACCTTAATAGCTCCTATGACGATGGTGGGAGAACATATTCAACTGGGTGTTTATCAAGATGCTATGGCAATATGTTTGATATCGTTGATGAAAGTTGTTCCGGATTCGGGTGTTGTCAGATGGATATTCCTCCTAACATGGTGAATATCTCTATCCAAGCAGCGAGCTTTGATAATTTCAAAGAATCTTTGAGTTTCAACAATTGCAGCTACTCTTTCGTTGTCAAAAATGGAAACTATACGTTTTATAAGGAGGATTTGAAGAAGCTGCGTTTTCATGATGTCGCTGTGATCTATGATTGGAGTGTTGGAAATGAAACATGCGAGGCTTCTAAAAACAGAGGTACCAATGCTTGCAAAAGAAATAGCGAGTGTGTGAGATCTAATGGCGCTGAAAATGGTTACCAATGTCGATGCAAGTTTGGTTTTGAGGGAAACCCATACCATCCTGATGGTTGTTCAGACATTGATGAATGTAAGATAGGAAGACATGATTGCATAAGTGGTGATAACTGCCATAATATGAATGGAACATACCGATGTTTTTGTCCTAAGGGACAACATGGAAATGGAACAAGGGAAGGAAGGTGCCAAGAGAATAATACACTTCCCAAGTTTGTCATTGGTGGAGGTGCAGGATTCATTGCTCTTTTGGCGGTGATTTTCTTTCTATACTGGATGTATCAAAAAAGAAAACTCAGCAAACTAAAAGAGAAATTTTTCAAACAAAATGGTGGTTATATTCTGCTACAACAGATCTCTACAAGAGGAGAATCCTCTCAAACAGTTCAACTCTTTACAGAAGATGAACTGAAGAAGGCCACAAAGAACTATGATGATAAGCTAATCATCGGCAGAGGAGGATATGGCACAGTTTTCAAAGGAGTTTTAACGAATAACAGAATTGTCGCAATAAAAAAATCTAAAATAGTTGATGAAAGCCAAATCGAACAATTCATTAACGAGGTGGTTGTTCTGTCTCGAATCAATCATCGTAACGTAGTGAAACTTTTAGGTTGTTGTTTAGAGACAGAGGTTCCTTTATTAGTTTACGAATTTATTAACAATGGTACACTTTTCAATTTCATCCACAAGGGTAGAAATGCAAATAATTTAATTTGGGAGACTCGTTTGAGAATAGCAACAGAAGCAGCAGGAGCTTTATCATATTTGCACTCAGCAGCCTCAATTCCAATTATCCATAGAGATATCAAAAGTTCCAATATTCTATTAGATAGCACTTACACTGCTAAAGTATCTGATTTTGGAGCTTCAAGATTTGTTCCACAAGATCAAATTGCATTAGCCACCATGGTGCAAGGAACTATTGGATATTTGGACCCTGAGTACATGCAAACAAGCCAATTGACTGAGAAAAGTGATGTTTATAGCTTCGGAGTGGTGCTTGCAGAGCTTCTAACAGGAGAAGAGCCTCTTTCTTTTGATAGATCGGAAGAGAAAAGAAGTCTTGCTATCTACTTCCTTTCTTCCTTGAAAGCGAATCGCGTGTTCGACGCGATTCAGGATGGAATTCTGAATGAGAAAAATGAGCAAGAGATCAAGGAGGTTGCTATTCTTGCTGCAAAATGTTTAAGCCTTAAAGGGGAAGATAGACCAAGTATGAAGGAAGTGGCAATGGAATTGGAAGGAATTAGAGTATTGCAAAAGCACCCTTGGAGCAATAATAATGGAGACAACAATCTAGGAGAAACTCAATGCTTGGTTCTTGATGAGACTTCATCAAGAATACACATGCATAGTGAACGTTGTAGCCATCAAAATTATAGGTATGATAGTATCAATGATCAACTGTCAAGTTCCTTAGATGGAAGATGA 2241 0.3896 MELKVMMLIVALVPLGVVAANRDHNQALDGCQRECGGVQIPYPFGIGKSNTTGENCSMDEPFELTCEEQDSILKSGDFQVTSINITKGQVEMMAPVSKSCRDTSSDETTYLVTFPSFTVSRNDNKFVSVGCDTFGYLNSSYDDGGRTYSTGCLSRCYGNMFDIVDESCSGFGCCQMDIPPNMVNISIQAASFDNFKESLSFNNCSYSFVVKNGNYTFYKEDLKKLRFHDVAVIYDWSVGNETCEASKNRGTNACKRNSECVRSNGAENGYQCRCKFGFEGNPYHPDGCSDIDECKIGRHDCISGDNCHNMNGTYRCFCPKGQHGNGTREGRCQENNTLPKFVIGGGAGFIALLAVIFFLYWMYQKRKLSKLKEKFFKQNGGYILLQQISTRGESSQTVQLFTEDELKKATKNYDDKLIIGRGGYGTVFKGVLTNNRIVAIKKSKIVDESQIEQFINEVVVLSRINHRNVVKLLGCCLETEVPLLVYEFINNGTLFNFIHKGRNANNLIWETRLRIATEAAGALSYLHSAASIPIIHRDIKSSNILLDSTYTAKVSDFGASRFVPQDQIALATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLAELLTGEEPLSFDRSEEKRSLAIYFLSSLKANRVFDAIQDGILNEKNEQEIKEVAILAAKCLSLKGEDRPSMKEVAMELEGIRVLQKHPWSNNNGDNNLGETQCLVLDETSSRIHMHSERCSHQNYRYDSINDQLSSSLDGR* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2406 746 ProSiteProfiles EGF-like domain profile. 290 333 IPR000742 -
Ahy6g2406 746 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 307 318 IPR000152 -
Ahy6g2406 746 ProSiteProfiles Protein kinase domain profile. 413 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2406 746 Gene3D Transferase(Phosphotransferase) domain 1 489 707 - -
Ahy6g2406 746 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 12 708 - -
Ahy6g2406 746 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 12 708 IPR045274 GO:0007166
Ahy6g2406 746 Gene3D Plasmodium vivax P25 domain 196 339 - -
Ahy6g2406 746 SMART egf_5 293 333 IPR000742 -
Ahy6g2406 746 SMART egf_5 242 289 IPR000742 -
Ahy6g2406 746 Pfam Wall-associated receptor kinase galacturonan-binding 31 91 IPR025287 GO:0030247
Ahy6g2406 746 ProSitePatterns Protein kinases ATP-binding region signature. 419 442 IPR017441 GO:0005524
Ahy6g2406 746 SMART serkin_6 413 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2406 746 Pfam Calcium-binding EGF domain 290 332 IPR001881 GO:0005509
Ahy6g2406 746 CDD STKc_IRAK 419 686 - -
Ahy6g2406 746 SUPERFAMILY EGF/Laminin 290 325 - -
Ahy6g2406 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Ahy6g2406 746 Gene3D Phosphorylase Kinase; domain 1 383 488 - -
Ahy6g2406 746 ProSitePatterns Calcium-binding EGF-like domain signature. 290 316 IPR018097 GO:0005509
Ahy6g2406 746 Pfam Protein kinase domain 414 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2406 746 SMART egfca_6 290 333 IPR001881 GO:0005509
Ahy6g2406 746 SUPERFAMILY Protein kinase-like (PK-like) 393 690 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2406 Ahy-Chr6 108434255 108437345 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2406 3 696 Receptor kinase-like Gene Family AT1G21230 46.393 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Ahy6g2406 Pkinase 1.30E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2406 - - adu:107495457 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2741 17 125627837 125631593 Ahy6g2406 6 108434255 108437345 PCT
Ahy8g0483 8 9700574 9704027 Ahy6g2406 6 108434255 108437345 PCT