Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2405 ATGGGAGTGAAGGGCATGTTATTTGTTATTGTTGCCTTGGTCCTTGTAGAAGTAGAAGTAGAAGTAGTAGCTATAGATGATATTGACAGTACTCAAATAGCTCTTCATGGGTGCCAAAGGAATTGTGGAGATGTTCAAATTCCGTATCCATTTGGCATAGGAAAAACCGAAAACGGTACTACCTGTTTCTTAGACAAACCATTTAATCTTACTTGCAACAGTAGTAGTTCCAGTTTAACATCGGGCAATGTCCAAGTTATAAACATCAACATCTCCCAAGGTCAAGCAGATATGTTGATTTTTGTCTCCAAATATTGTTATAATAGTAGCTATGGTAACAACGCTGTAAGTAGCCAACCCAGCGGGCTCATAAGTAGTTCTTCTTTCACCATTTCGAGCAAAGACAACAAGTTCATAAGTGTTGGCTGCGATACTTACGGCTATCTTAATAGCTTCTACAACAACAATGCAGGTTATTCAACAGGGTGCTTAACAAGATGTTATGGCAACACTAAGGAAATCAAGGATGGAGATTGTTCCGGTATTGGGTGCTGTGAGGTGGATATTCCTCCCAAGATGAGATCGGTCTCAACTCAAGCAGGTACCTTTTTCAATTTCCAGGATTCTCTGGTCTTCAACAACTGTAGCTATTCCTTTGTTGTCAAGAATGGCAACTACACGTTTAAGAAGGCCCACTTGGAGAATCTACCATATGAGATGCTCCCTGTGGTGTTCAATTGGAGTGTTGGAAACGAAACATGTAAAAAATCACTCAACAGAGGTACCAACATTTGCAAGGGAAATAGTATTTGTATGGATGCAGAAAGTGGATATGGTTACCGGTGTCAATGCCAGAAAGGTTTTGAAGGAAATCCATACCTTCATAATTGCACAGATATTGATGAATGTGAGACGGGACAACATTCATGTGCAAGTAAACATAATTGTCGCAATGAAATTGGATTCCACGGATGCTTTTGTCCTAACGGACAATCAGGAAATGGATCAACAATAGAAGGGTGCCACAAGAAAAATTTGCTTCCACAAATTGTGATTGGTGCAAGTGCAGGATTCATAGCTATTTTTGTGGGAACTTCTTTGCTATACTTAACACACCAAAAGAGAAAATTCATCAAACTTAAAGAGAAGTTTTTTAAGCAAAATGGTGGTCTTCTTTTGCTACAACAACTCTCTTCAAGAGAAGAATCCTCCCATACTATTCAAATTTTCACCGCCAAAGAATTGAAGAAGGCCACCAACAACTATGATGAGAACTTAATCATTGGCAGGGGAGGTTTCGGCACAGTTTTCAAAGGAGTTCTAGAGAATAACACAATTGTTGCTATCAAGAAGTCCAGAATAGTTGATGCTGACCAAGTTGATCAATTCATCCACGAGGTTATCGTTCTGTCCCAAGTTAACCACAGAAATGTGGTGAAGCTTTTGGGTTGTTGTTTAGAAACAGAAGTCCCTCTTCTTGTCTATGAGTTTGTAAGGAATGGCACACTTTTCGATTTCATCCATAATGAAAACAAGAGAAATCATTTCAATTGGGAAAATCGTCTCAGAATTGCAACAGAGACAGTCGGAGCTTTATCATATCTTCATTCATCTGCTTCCATTCCAATTGTCCACAGAGATGTTAAGAGTACTAACATTCTCTTAGACGAAGATTACACTGCCAAAGTCTCTGACTTTGGAGCTTCAAAATTTGTTCCATTGAATCAAAATACATTAGCTACAGTGGTGCAAGGAACTTTTGGTTACTTGGATCCAGAATACATGCAAACTTGCCAACTAACTGAAAAAAGTGATGTGTATAGCTTTGGTGTTGTGCTCGCTGAGCTTCTTACGGGAAAGAAACCTCTTATGTTTGAGAAGTCGGAAGAGAAAACAAATCTTGCTATGTACTTGACATCTTGCCTGGAAGAGGATCGCTTGTTTGAAGCTCTTCAAGTTGGAATCTTGAACGAAGAAAATAAACAAGAGATTGTGGAAGTTGCTATTGTTGCAGCAAAGTGTTTGAGACTTAAAGGCGAAGAAAGGCCAAGCATGAAGGAAGTGGCAATGGAATTAGAGGGAATAAGGTTAATGTCAAAGTCCCACTGGGTTAATAATGCAGACAAGAATTTTGAAGAGATCCAGCACTTGCTTCCAGTGTCATCATCGTCAGAAAAATATGAGCATGGTGATAGCAGCAGTGGCAGTCATCAAAATACCAAATATGATAGTATCATCAGGGATCAAGAAGTGCTAATTGCCTTGCCAAGTGGAAGGTGA 2280 0.3934 MGVKGMLFVIVALVLVEVEVEVVAIDDIDSTQIALHGCQRNCGDVQIPYPFGIGKTENGTTCFLDKPFNLTCNSSSSSLTSGNVQVININISQGQADMLIFVSKYCYNSSYGNNAVSSQPSGLISSSSFTISSKDNKFISVGCDTYGYLNSFYNNNAGYSTGCLTRCYGNTKEIKDGDCSGIGCCEVDIPPKMRSVSTQAGTFFNFQDSLVFNNCSYSFVVKNGNYTFKKAHLENLPYEMLPVVFNWSVGNETCKKSLNRGTNICKGNSICMDAESGYGYRCQCQKGFEGNPYLHNCTDIDECETGQHSCASKHNCRNEIGFHGCFCPNGQSGNGSTIEGCHKKNLLPQIVIGASAGFIAIFVGTSLLYLTHQKRKFIKLKEKFFKQNGGLLLLQQLSSREESSHTIQIFTAKELKKATNNYDENLIIGRGGFGTVFKGVLENNTIVAIKKSRIVDADQVDQFIHEVIVLSQVNHRNVVKLLGCCLETEVPLLVYEFVRNGTLFDFIHNENKRNHFNWENRLRIATETVGALSYLHSSASIPIVHRDVKSTNILLDEDYTAKVSDFGASKFVPLNQNTLATVVQGTFGYLDPEYMQTCQLTEKSDVYSFGVVLAELLTGKKPLMFEKSEEKTNLAMYLTSCLEEDRLFEALQVGILNEENKQEIVEVAIVAAKCLRLKGEERPSMKEVAMELEGIRLMSKSHWVNNADKNFEEIQHLLPVSSSSEKYEHGDSSSGSHQNTKYDSIIRDQEVLIALPSGR* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2405 759 Gene3D Transferase(Phosphotransferase) domain 1 498 717 - -
Ahy6g2405 759 ProSitePatterns EGF-like domain signature 2. 282 297 IPR000742 -
Ahy6g2405 759 ProSiteProfiles EGF-like domain profile. 299 337 IPR000742 -
Ahy6g2405 759 Gene3D Laminin 251 341 - -
Ahy6g2405 759 Pfam Calcium-binding EGF domain 299 334 IPR001881 GO:0005509
Ahy6g2405 759 ProSiteProfiles EGF-like domain profile. 257 298 IPR000742 -
Ahy6g2405 759 Gene3D Phosphorylase Kinase; domain 1 394 497 - -
Ahy6g2405 759 SUPERFAMILY EGF/Laminin 299 334 - -
Ahy6g2405 759 Pfam Protein kinase domain 424 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2405 759 CDD STKc_IRAK 428 695 - -
Ahy6g2405 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Ahy6g2405 759 SMART serkin_6 422 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2405 759 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 18 721 - -
Ahy6g2405 759 ProSiteProfiles Protein kinase domain profile. 422 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2405 759 SUPERFAMILY Protein kinase-like (PK-like) 399 693 IPR011009 -
Ahy6g2405 759 ProSitePatterns Protein kinases ATP-binding region signature. 428 451 IPR017441 GO:0005524
Ahy6g2405 759 Pfam Wall-associated receptor kinase galacturonan-binding 38 94 IPR025287 GO:0030247
Ahy6g2405 759 MobiDBLite consensus disorder prediction 722 741 - -
Ahy6g2405 759 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 721 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2405 Ahy-Chr6 108424635 108427676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2405 38 745 Receptor kinase-like Gene Family AT1G21230 46.547 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Ahy6g2405 Pkinase 3.00E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2405 - - adu:107495457 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy6g2405 6 108424635 108427676 Ahy17g2738 17 125569033 125573749 PCT
Ahy6g2405 6 108424635 108427676 Ahy8g0482 8 9691345 9696103 PCT
Ahy17g2738 17 125569033 125573749 Ahy6g2405 6 108424635 108427676 PCT
Ahy8g0482 8 9691345 9696103 Ahy6g2405 6 108424635 108427676 PCT