Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2397 ATGGCTACCAATAATGATAATAATAATATTGTTAGTTATATATGCAAAAGAACTGTGGTTAGCACAAAGCCAATTGAACCGGGAAAATACATGACCTTTTCGGTTCTTGATAGATGCATGGAGAAAAACCACATTAGGATGGTGTACTATTACCAAAGTTCATTAGGGGAGGGAGAATTTGGTAAAATGACAAAGAATTTAAGAGAAACATTGTCAGAGATGCTAAACTATTATCCAATGGTAACTGGAAGGCTAGTGAGGGATAGTGAAGAGAAGTGGAAGGTGAAATGCAATGATGCTGGGGTGAGAGTGGTGGAGGCAAAAGCCAAAGGGAGTGTGGAGGAATGGTTGAAGAATGTAGATAGTGAAAAGGAACACATGCTTGTGTATTGGGAGGACATGTATCATAAGCCTTATTATTGGTCAACTTTTTATGTCCAGATAACTGAATTTGAAGAAGGAGGATTAGCAATTGGCCTAAGTTGTTTTCATCTTCTAGCAGATTACACTAGTGCAACCAACTTCTTGAAGGCTTGGTCTGATATTTCATTAGGCAACAAAATTACTGTTCTTCCATTATTCCATCCTTTACCTTCAACAAGAAAAAGAATTTCCAATCACCACCCATATTTTGAATTAATCAACCACTATAAATCCTCAATTGAGAGACCCATTCCAATAAAAGAAGAAAAGTACACTATTATATCACTGGGCTTCTCACACCAAATGGTTAATGCTTGCATTTCTAAGGCCCAATTTAATGGTCCATCAGGCCCAATAACAATGACTCCTTTTGAAGCACTAGCAGGCCTGTTTTGGGCTTCAATTAGCAACATCAAGGGATTACAAAATGGGCTCATTGACATGTCTATATGTTTAGATGCAAGAAAATTGTTGGGCCTGGACTATGGATTCTTTGGGAACACAATGATATATAATAAGGTCCATGCCAATGGTAATTTAGAAGGTAACATATTTGTACAAGCTACAAGGTATATAAGAGAAGTTGTAGCAAAAATGGACAATGAGGGAATAATGGACCTAATTGAGTGGCTTGAAAAAAATGAGATGAATTCACCAAGAATGATCAACGGTCCTGATTTGATTTGTGTTAGCTTGGAAAATGTAGAGCCTTATTTGAGTGTGTTTGAAGATTGGTTGAAACCACTTAGGGTTTCATGTTACATAGAGCCAGTTTTGGGTGAAGGACAGGTTTTGATCCTCCCAGGAACACCAGAGGAGGGTCCTTTAAGCAGGGTGGTTATGGTGACACTTAAGGAAGATGAGGCAATTAAGCTTTTTGAAGATGATCTCATCTCCCAATTCTCTCCAACTATCTTCATGAAATGTTAA 1353 0.3777 MATNNDNNNIVSYICKRTVVSTKPIEPGKYMTFSVLDRCMEKNHIRMVYYYQSSLGEGEFGKMTKNLRETLSEMLNYYPMVTGRLVRDSEEKWKVKCNDAGVRVVEAKAKGSVEEWLKNVDSEKEHMLVYWEDMYHKPYYWSTFYVQITEFEEGGLAIGLSCFHLLADYTSATNFLKAWSDISLGNKITVLPLFHPLPSTRKRISNHHPYFELINHYKSSIERPIPIKEEKYTIISLGFSHQMVNACISKAQFNGPSGPITMTPFEALAGLFWASISNIKGLQNGLIDMSICLDARKLLGLDYGFFGNTMIYNKVHANGNLEGNIFVQATRYIREVVAKMDNEGIMDLIEWLEKNEMNSPRMINGPDLICVSLENVEPYLSVFEDWLKPLRVSCYIEPVLGEGQVLILPGTPEEGPLSRVVMVTLKEDEAIKLFEDDLISQFSPTIFMKC* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2397 450 Gene3D - 8 212 IPR023213 -
Ahy6g2397 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 449 - -
Ahy6g2397 450 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 10 449 - -
Ahy6g2397 450 Pfam Transferase family 13 436 - -
Ahy6g2397 450 Gene3D - 219 436 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2397 Ahy-Chr6 108197149 108199836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2397 34 435 Monolignol Biosynthesis Gene Families AT5G48930 24.823 5.45e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2397 - - cam:101505678 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3078 16 146415616 146419240 Ahy6g2397 6 108197149 108199836 hybridization