Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2386 ATGGCTGGTGAATCAAATTTGGATGGAGCTTACACAGCGCTACAGGCATGGAAATCTGCAATCACTGATGACCCAAAGAAAAATCTAGGAACATGGGTTGGTCCAAATGTGTGTTCTTACAAAGGGGTTTTTTGTGATTTTACTGAAGATGAAATGGGTGCATCTGCATCAGCATTCCCTGTAGTTGCAAGCATAGATCTCAACCATGCAAATCTCCAAGGAACCCTTATCAAAGAGTTATCTTTACTCACTGACATGTCCCTTTTCCACCTTAACAGTAACAGTTACTTCTCCGGGACAATCCCTCAAGAACTCTTCTACAAGAATCTTGATGCATTGTTTCTCAACAACAATCAATTTGAAGATGAAATTCCTCAGAATCTTGAAAATTCTCCTGCATCAGTGATAAATTTAGCCAACAACAAGTTGAGTGGAAACATCCCAGCAAGTTTTGGATTCATGGGTTATAGAAAGACAACACCTGATGCTTGA 492 0.3984 MAGESNLDGAYTALQAWKSAITDDPKKNLGTWVGPNVCSYKGVFCDFTEDEMGASASAFPVVASIDLNHANLQGTLIKELSLLTDMSLFHLNSNSYFSGTIPQELFYKNLDALFLNNNQFEDEIPQNLENSPASVINLANNKLSGNIPASFGFMGYRKTTPDA* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2386 163 Gene3D Ribonuclease Inhibitor 10 158 IPR032675 -
Ahy6g2386 163 PANTHER LRR/EXTENSIN 5 95 - -
Ahy6g2386 163 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 5 95 - -
Ahy6g2386 163 Pfam Leucine rich repeat N-terminal domain 11 46 IPR013210 -
Ahy6g2386 163 PANTHER LRR/EXTENSIN 96 156 - -
Ahy6g2386 163 SUPERFAMILY L domain-like 11 152 - -
Ahy6g2386 163 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 96 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2386 Ahy-Chr6 107862983 107863598 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2386 6 154 Trihelix Transcription Factor Family AT3G19020 40.816 3.94e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2386 - - ahf:112805894 333.569