Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2368 ATGGCATCGAGTTCAATGTCATCTTCAGGGTCATGGACTGCTAAAGACAATAAGGCCTTTGAAAGGGCATTGGCGGTCTATGATAAGGACACGCCTGACCGTTGGTACAACGTTGCTCGCGCCGTCGGCGGAAAAACTCCCGACGAAGTTAAGCGCCACTACGAACTTCTCCTCAGAGATGTTGGCTACATAGAATCTGGACAAGTGCCATTCCCAAAGTATAAGAAAAATGGAGGCTCTAATTAG 246 0.4797 MASSSMSSSGSWTAKDNKAFERALAVYDKDTPDRWYNVARAVGGKTPDEVKRHYELLLRDVGYIESGQVPFPKYKKNGGSN* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2368 81 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Ahy6g2368 81 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Ahy6g2368 81 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 79 IPR044636 GO:0003700
Ahy6g2368 81 Pfam Myb-like DNA-binding domain 10 55 IPR001005 -
Ahy6g2368 81 CDD SANT 12 58 IPR001005 -
Ahy6g2368 81 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 79 - -
Ahy6g2368 81 SUPERFAMILY Homeodomain-like 4 59 IPR009057 -
Ahy6g2368 81 Gene3D - 2 71 - -
Ahy6g2368 81 SMART sant 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2368 Ahy-Chr6 107611444 107611782 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy6g2368 Myb_DNA-binding 8.80E-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2368 - - vra:106761815 144.436