Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2367 ATGGCATCGAGTTCAATGTCATCTTCAGGGTCATGGAGTGCTAAGGACAATAAGGCCTTTGAAAGGGCATTGGCGGTTTATGATAAGGACACCCCTGACCGTTGGTACAACGTTGCTCGCGCCGTTGGCGGAAAAACTCCCGACGAAGTTAAGCACCACTACGCACTTCTCCTCCGAGATGTTGGCTACATAGAATCTGGGCAAGTGCCATTTCCAAAGTACAAGACAAATGGAGGCTCTAATTAG 246 0.4878 MASSSMSSSGSWSAKDNKAFERALAVYDKDTPDRWYNVARAVGGKTPDEVKHHYALLLRDVGYIESGQVPFPKYKTNGGSN* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2367 81 SMART sant 8 60 IPR001005 -
Ahy6g2367 81 CDD SANT 18 58 IPR001005 -
Ahy6g2367 81 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 79 - -
Ahy6g2367 81 Pfam Myb-like DNA-binding domain 10 55 IPR001005 -
Ahy6g2367 81 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Ahy6g2367 81 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Ahy6g2367 81 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 79 IPR044636 GO:0003700
Ahy6g2367 81 Gene3D - 2 71 - -
Ahy6g2367 81 SUPERFAMILY Homeodomain-like 4 60 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2367 Ahy-Chr6 107584031 107584873 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy6g2367 Myb_DNA-binding 4.00E-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2367 - - vra:106761815 139.043