Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2356 ATGTATGCAGAAACTGGTCTTTTCTTCCCTTATTTGCAGAACTTCTCTCAAGAGCTTCAACAGCTTGAGGAGTATTGCATGAACCAGAAATCCATTGATTCAATGAGTGACCTTGCTCAATCTTCAGTAATGACAGAGTATGATCTGTTAGTAGAAGGAGATTTGTTCAAAGCACCGGAACCTATCATCGAAGAACCACTGATAGACGTGGATCCGATGACTGCAGCAGCCATCTCAATGATATCTTGCGGGGAAGATGTATCCTCACAGGGTCTAGAATCTCAGGACATCGACATTCTTCAGAACGATAATCAGCTCTTGAGTGAGGTGTTCTACGAGTGCAAAAAGGATCTCATAGAGAAGGCAGCTATAGAGTCACCGCTGTCTGATATATTGGAAATCAATATTCCTGCTCTGAATGTAGATGACAGTTTCACTCAGGAAAATAAACCAATTCCTGATGTGCCATTGGCCAAGAGTGTCAGTTCTAGAAGCTTGAGTGCAATGGATTGGATGAATTCTGTTGGCATGAAGCCTGCTTTTCTAGAATTCCCTGGAATTGATTTCAATGAGGTTTATGGCATGCGACGAGCATTTAGTGACGGAGATATAAAGACACTTGGTAATGGAAACATGAATGTTGCTCAATCTCCCCATGATAGGCCTTCTCTTCTTAGCAACTGCACCAGCGAGGAACGGCAAGAAAAACTCTCGAGATATAGAAACAAGAAGACAAAGAGAAATTTTGGAAGGAAGATTAAGTATGCTTGCAGGAAGGCACTCGCCGACAGCCAGCCAAGAATCCGCGGAAGGTTTGCAAAGACGGAAGAATCTGACATAAAGAGGCAATGA 852 0.4284 MYAETGLFFPYLQNFSQELQQLEEYCMNQKSIDSMSDLAQSSVMTEYDLLVEGDLFKAPEPIIEEPLIDVDPMTAAAISMISCGEDVSSQGLESQDIDILQNDNQLLSEVFYECKKDLIEKAAIESPLSDILEINIPALNVDDSFTQENKPIPDVPLAKSVSSRSLSAMDWMNSVGMKPAFLEFPGIDFNEVYGMRRAFSDGDIKTLGNGNMNVAQSPHDRPSLLSNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESDIKRQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2356 283 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 26 281 - -
Ahy6g2356 283 Pfam CCT motif 233 275 IPR010402 GO:0005515
Ahy6g2356 283 ProSiteProfiles CCT domain profile. 233 275 IPR010402 GO:0005515
Ahy6g2356 283 PANTHER CCT MOTIF FAMILY PROTEIN 26 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2356 Ahy-Chr6 107312338 107315890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2356 208 279 C2C2-CO-like Transcription Factor Family AT5G57660 40.506 4.09e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy6g2356 CCT 1.80E-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2356 - - gmx:100814332 432.18