Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2348 ATGAGCATGAAGCTGAGCCTCTTCATATTTGCTTTCATGATCATTGGAGCAATGTTCTTTGGTGCTGAGGCTGAACTATTGGAAGATGAACAAGCTTTGCTTGATTTCTTTCACAAAATTGATCACTCAAAGCATCTCAATTGGGGTTACAAGACTTCTCTATGCAAGAGCTGGACAGGAGTAACCTGTGACTCTCACCAATCACGAGTCGTCGGCCTCAGGCTACCGCGAGCCGGATTAATTGGTCCCATACCATCCAACACTCTCAGTCGCCTCTCGGCGCTTCAGACTCTGAATCTTGAATCAAATAGCATAACTGGTCCATTGCCATTGGATTTTTCAGTTTGGAAAAATCTTACCATAGCAGATTTTTCCAACAATTCTTTCATTGGAAGCATCCCTTCCTCAATTTCAAAGTTGACTCATCTCAATTCTTTAGATTTGTCCAACAACTCTCTTTCGGGTGAAATTCCTGACCTCAAAGTTCCTAGCTTGAAAGAGCTGAATTTGGCCAACAATAACCTTAGTGGAATTGTGCCAAAATCCCTTCAGAGATTTCCGAGTTGGGTCTTTTCCGGTAACAAGCTTAATCTTGATCTTACTCTTAATCACACCTCTGAATATGCATCTGCTAATTCTCCTCTTCAACAACCGAATAATTCTCACCCAACAAGGAAAAACAAAAGGCTCAGTGAACCTGCATTGCTTGGTATCATAATAGCTGTTAGTCTGGTGGGATTTGCAGCCATCGCGAGTTTCGCAATTGTGTTGTGTTATAAGAAAGGTAATGGTGGTGGAGGTGGACAGTCAGTTATGAAGTCCCATAAAACAGAATTCTCGTCGAAGACAGAAGCTTCTTTGAGCAGAGACAGGAACAAAATAATCTTCTTTGAAGGCTGCAATCTTGCATTTGACCTGGAGGACTTGTTGAGAGCTTCTGCTGAGGTTCTTGGAAAGGGCACATTTGGAACTGTGTATAAGGCTGCAATAGAAGATGCAACGACGGTGGCGGTGAAGAGGTTGAAAGAGGTAACTGTCGGAAAACGCGAGTTCGAACAGCAGATGGAGGTGGTGGGGAGAATTAGGCATGACAACTTGGCTGCTCTAAGAGCATATTATTACTCAAAGGAGGAGAAACTTATGGTATATGATTATTATGAACAGGGCAGTGTTTCTTCAATGTTACATGGCAAAAGAGGGGAAGGCAGGGTTTTGTTAGATTGGGAAAGTCGGCTAAGGATTGCGATGGGCACAGCAAGAGGCATTGCTCATATCCATGCTCAAAACGGAGGGAAACTAATCCACGGTAACATTAAGTCCTCAAATATCTTCCTCAACTCCCAGGGATATGGTTGTATATCGGACACCGGCCTCGCCACATTAATTAGCCCAATACCACCAGCAGCACTAAGGGCAGCAGGATACCGTGCACCAGAAGTAACCGACACGCGGAAGGCGACGGTTGCAGCTGATGTCTACAGTTTCGGAGTCCTCCTTCTAGAGCTCCTAACAAGAAGGTCTCCAATGCACGCCACTGGAGGAGAGGAAGTAGTCCACTTAGTTAGGTGGGTGAACTCTGTTGTTAGAGAGGAGTGGACTGCAGAAGTCTTTGATGTGGAATTACTAAAGTACCCTAACATAGAGGAGGAAATGGTTGAGATGCTACAATTGGGATTGGCATGTGTTGCTAGGGTTCCAGATAAGAGACCAACAATGGTGGAAGTGGTGAAAGTGGTGGAGGAAATTCGATTACATAGTGGGAATAGACCGTCCTCGGAATCTAGGTCAGAGGGTTCTTCTACACCAAATAGAGGACATGCTTCCACATCAATTATTACAGAGTGA 1845 0.4439 MSMKLSLFIFAFMIIGAMFFGAEAELLEDEQALLDFFHKIDHSKHLNWGYKTSLCKSWTGVTCDSHQSRVVGLRLPRAGLIGPIPSNTLSRLSALQTLNLESNSITGPLPLDFSVWKNLTIADFSNNSFIGSIPSSISKLTHLNSLDLSNNSLSGEIPDLKVPSLKELNLANNNLSGIVPKSLQRFPSWVFSGNKLNLDLTLNHTSEYASANSPLQQPNNSHPTRKNKRLSEPALLGIIIAVSLVGFAAIASFAIVLCYKKGNGGGGGQSVMKSHKTEFSSKTEASLSRDRNKIIFFEGCNLAFDLEDLLRASAEVLGKGTFGTVYKAAIEDATTVAVKRLKEVTVGKREFEQQMEVVGRIRHDNLAALRAYYYSKEEKLMVYDYYEQGSVSSMLHGKRGEGRVLLDWESRLRIAMGTARGIAHIHAQNGGKLIHGNIKSSNIFLNSQGYGCISDTGLATLISPIPPAALRAAGYRAPEVTDTRKATVAADVYSFGVLLLELLTRRSPMHATGGEEVVHLVRWVNSVVREEWTAEVFDVELLKYPNIEEEMVEMLQLGLACVARVPDKRPTMVEVVKVVEEIRLHSGNRPSSESRSEGSSTPNRGHASTSIITE* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2348 614 MobiDBLite consensus disorder prediction 591 614 - -
Ahy6g2348 614 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Ahy6g2348 614 PRINTS Leucine-rich repeat signature 143 156 - -
Ahy6g2348 614 PRINTS Leucine-rich repeat signature 162 175 - -
Ahy6g2348 614 SUPERFAMILY Protein kinase-like (PK-like) 315 579 IPR011009 -
Ahy6g2348 614 Pfam Protein kinase domain 314 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2348 614 Gene3D Transferase(Phosphotransferase) domain 1 386 600 - -
Ahy6g2348 614 ProSitePatterns Protein kinases ATP-binding region signature. 317 348 IPR017441 GO:0005524
Ahy6g2348 614 ProSiteProfiles Leucine-rich repeat profile. 164 185 IPR001611 GO:0005515
Ahy6g2348 614 Pfam Leucine Rich Repeat 164 185 IPR001611 GO:0005515
Ahy6g2348 614 Pfam Leucine Rich Repeat 95 114 IPR001611 GO:0005515
Ahy6g2348 614 PANTHER LRR RECEPTOR-LIKE KINASE 12 603 - -
Ahy6g2348 614 Gene3D Phosphorylase Kinase; domain 1 276 385 - -
Ahy6g2348 614 Gene3D Ribonuclease Inhibitor 27 206 IPR032675 -
Ahy6g2348 614 SUPERFAMILY L domain-like 41 196 - -
Ahy6g2348 614 PANTHER OS05G0588300 PROTEIN 12 603 - -
Ahy6g2348 614 MobiDBLite consensus disorder prediction 586 614 - -
Ahy6g2348 614 ProSiteProfiles Protein kinase domain profile. 311 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2348 Ahy-Chr6 107082882 107087425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2348 18 602 Receptor kinase-like Gene Family AT4G23740 51.506 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy6g2348 Pkinase 7.60E-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2348 - - aprc:113851984 819.69