Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2336 ATGTCTAGATCGAATGTTACTCGAGGTCAAACTGGGATGATGGAGAATTACCGAATTCACACTCTTATAAAAACCGATCCGGACCGGACGCTTCTTCTTCCTCGAGCTCAGCGCGTCAGTTCCTGGTATTCATCTGCTTCATCGCGCTCCTGCCGCCGTCCGTCGGGCGCTCAGTCACCATCGTCTTCGTCTAGTCGTCGCAGATTCTTCCAACCACCACCGTCTTCTGAGTTGTGTTCGTCGCCTGGCCTCTGTCTCCGTCACGATTCTGCCCCCCTTCTTCTCAGACTGCTCAGAAGAAAAACCCGTCTCCATTCCAGTTTCCTTCCTTCGAGTTCAGAGAGCAGAAGCTCAACCAAGATAAAAACGTTAGACTTCGACGATTGTGAGAAGGGAAAGCTGCTAGATTGGCCAAAGCGTTTTCGTATTATCAATGGGATTGCCAGAGGTCTTCTTTATCTTCGTCAAGATTCAAGACATTTAATAGTTCATAGAGATCTCAAGGCTGGAAATGTTTTGTTAGATGATGAATTGGATCCTAAAATCTCGGACTGTGGAAGAGCAAGAAGCTTTGTAGGAAATGAAAGCGAAGCAAATACAAGACATATTGTTGGAACTTATGGCTATCTATCACCAGAGTACATAGTTGGTGGGTTGTACTCAACAAAATCTGATGTCTATAGCTTTGGTGTACTAATATTAGAAATAGTTAGTGGTAATCTGATGTCTATGCTTTGGTGTACTAATATTGTGACCACTACTTTAATCTTCTTGCCGATGTAA 783 0.4419 MSRSNVTRGQTGMMENYRIHTLIKTDPDRTLLLPRAQRVSSWYSSASSRSCRRPSGAQSPSSSSSRRRFFQPPPSSELCSSPGLCLRHDSAPLLLRLLRRKTRLHSSFLPSSSESRSSTKIKTLDFDDCEKGKLLDWPKRFRIINGIARGLLYLRQDSRHLIVHRDLKAGNVLLDDELDPKISDCGRARSFVGNESEANTRHIVGTYGYLSPEYIVGGLYSTKSDVYSFGVLILEIVSGNLMSMLWCTNIVTTTLIFLPM* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2336 260 Gene3D Transferase(Phosphotransferase) domain 1 122 256 - -
Ahy6g2336 260 ProSiteProfiles Protein kinase domain profile. 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2336 260 SMART serkin_6 17 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2336 260 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 124 240 - -
Ahy6g2336 260 SUPERFAMILY Protein kinase-like (PK-like) 130 242 IPR011009 -
Ahy6g2336 260 MobiDBLite consensus disorder prediction 47 78 - -
Ahy6g2336 260 MobiDBLite consensus disorder prediction 47 81 - -
Ahy6g2336 260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Ahy6g2336 260 Pfam Protein kinase domain 142 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2336 260 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 124 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2336 Ahy-Chr6 106794951 106798700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2336 122 254 Receptor kinase-like Gene Family AT3G45860 56.738 7.02e-45 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy6g2336 Pkinase 1.70E-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2336 - - ahf:112805883 475.707