Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2301 ATGAAGAAAGCGGAAGGGGAGAGTAGTTTAGATTTAGACAGTGATGTTATTGCATCTGAGATCAAAGCAGGATCAGTAAGTGATCCACTGGCCGAGGCGGTTCGAGGAACCATTCAAAATGATTCAGAGAAGAGAAAGGGCAAAGATGAAGCGAAAAACACAATCCCCTTCTACAAGCTCTTCTCTTTTGCAGACGCTTTGGATTATGCATTGATGATTGTGGGGACAATCGGTGCTGTTGGAAATGGAATGGCAAACCCTTTGATGACCGTTGTTTTTGGGAGCTTAATTGATGCATTTGGAGGCACCTCAAACTCCCAAAAAGTTGTTCATGATGTTTCCAAGCTGGCTCTCAAGTTTGTATACCTGGCTCTGGGTTCCTTTGCAGGATCCTTTCTTCAGGTTTCTTGCTGGATTGTCTCTGGGGAGCGACAATGTGCAAGAATAAGAAGCTTATACCTGAAAACAATTCTGAGGCAGGATGCCGGCTTCTTCGACACGGAAACCAACACCGGCGAGGTTGTTGGAAGGATGTCAAGTGACACTATGCTAATTCGAGAAGCCATGGGTGAGAAGGTAGGACAGTTTGTACAGTTAGTGGCATCGTTCGTTGGAAGTTTTGTCATAGCGTTCATCAAGGGATGGCTTCTTACCCTTGTTTTGCTGTCCTGTATTCCACCTCTTGTTCTTGCTAGCGCCGTCATGAGCATCGTTATTGCCAAAGTGACATCGCGAAGACAAGTAGCATATTCTGCAGCTGCATCTGTAGTAGAAGAGACTATTGCTTCTATCAGAACTGTTGCGTCATTCACGGGCGAGAAGCAAGCCGTGGCTAAGTATAATCAATCATTGTTGAAAGCTTATAAGACTGGAGTTCAAGAAGGAGTGGCTTCTGGATTGGGATTTGGTTCCATTCTTCTCATTGTTTTCTGCACTTATGCCTTGGCCATATGGTATGGTGGCAAATTGATTTTAGACAAAGATTATACAGCAGGGAAAATTATCACCATAATTTTCGCAATTTTGACAGGATCTCATTCTCTTGGACAGACCTCTCCTAGCATGAGTTCGTTTGCAGCAGGACAAGCCGCAGCTTATAAGATGTTTGAAACGATTAATAGGCGACCTGATATCGATGCTTACGACACAACTGGCCGGCAGCTGGATGATATTCGAGGCGACATAGAACTGAGAGAAGTTGGCTTCAGTTATCCGTCAAGGCCGGATGAGACTATATTCAATGGATTCTCTTTGTTCATACCAAGTGGCACAACTGTAGCTTTGGTAGGGCAAAGTGGGAGTGGAAAATCAACCGTTATTAACTTGATAGAGAGGTTTTATGATCCGCAAGCTGGTGAAGTTCTCATCGACAACATCAATCTCAAAGAGTTTAATCTGAAATGGATAAGACAAAAGATTGGCCTAGTTAGCCAAGAACCTGTTCTGTTTACTTGCAGCATCAAAGAAAATATCGCTTATGGTAAGGATGGTGCGACTGATGAAGAAATCAAAGTAGCAGCAGATCTTGCAAATGCTTCTAAGTTCATAGACACGCTTCCACAGGGACTGGACACGATGATTGGTGAACACGGAACTCAGCTCTCTGGAGGTCAAAAGCAGAGAGTTGCAATAGCAAGAGCCATTTTGAAAGATCCAAGAATTCTACTTCTTGATGAAGCTACAAGTGCACTTGATGCTGAATCCGAGAAAACAGTGCAGGAGGCTCTAGACAAAATCATGATAAATCGAACCACTGTTATTGTAGCTCACCGCTTAAGCACTGTTAGAAATGCTGCCACTATAGCTGTAATTCATCAAGGAAAAATAGTAGAAAAAGGTTCACATTCTGAGCTCACTAAAGATCTTGAAGGAGCCTACAGCCAACTCAATAGATTGCAAGAGACTAACAGTGAGGCAGAACAGAATTTTTCTGTTGAAACAGAAAACCTTGAATCTACTACAAATTCTTCAAGGCATTCAAGTCAACGGTTTTCTTTTAGAAATTCCATAACTCATGTATCCGGCGTTGGAAACATCAAAGACGATAAAGTTGCTCTTGCAGAAGACACAAACTCAAAACAACCTCCAAAAATACCGATCCGTCGCTTAGCTAAACTAAACAAGCCTGAGATCCCAGTCTTGATACTAGGGACTATAGCTGCAGTGGCCAATGGCATCATATTACCCTTTTTCGGGTTCATGGTTTCAAAGATGGTCAATATTTTCTATGAGCCTGCGGATGAACTCCGCAAAGATTCAAGATCTTGGGCGTATGTTTTCGTGGCGCTTGGCGTATCAGCGTTCTTTATCAATCCCTTGAGGTCCTACTTCTTTTCTGTTGCTGGTGAAAAGCTGGTAAAAAGAATGAGACTAATCTGTTTTGAGAAAATGATTAATATGGAAGTTAGTTGGTTTGATGAAGCTGAGCATTCAAGTGCTGCACTTGGATCAAGGCTGTCCACTGATGCAGCGTCTATTCGAGCTTTGGTTGGCGACGCACTCGGATTAATGGTTCAGAACATAGCTGCTGCAGTTGCAGGCCTGGTGATTGCATTCCAAGCAAACTGGCAGCTCTCTGTTATAATTCTTGTATTGCTGCCTATATTAGCACTTAACGGAATTCTTCAGATGAAGTTCTTACAAGGATTCACTGCAGATGGAAAGAAATTATACGAGGAAGCAAGTCAAGTAGCAAGTGATGCTGTAAGCAGCAGTAGGACTGTGGCATCTTTCTGCGCTGAAGAGAAGGTGATGGAGTTGTACAAGAAGAAATGTGAGGCACCGATTAAGGCAGGCATAAAGCAAGGGATAATAAGTGGAGTTGGTTTTGGGTTATCATTCTTGTTTCTGTTTTCAGTGTATGCATGTAGTTTCTATGCTGGAGCTAAACTTGTAGGGGATGGTAAAGCATCTTTCTCTGATGTTTTCCGCGTCTTCTTTGCCCTGAATATGGCTGCTGTGGGGATGTCTCAAACTAGCACCTTGGCCCCTGACTCAGCTAAAGCTAAAAGTGCTGCTGCTTCTGTGTTGGCCATTATTGACAGAAAATCAAAAGTAGATCCCAATGATGACAATGGTCTGATTCTAGAAAACTTGATGGGAGAAGTAGAGTTTCACCATGTCACTTTCAAGTACCCCACAAGACCTGATGTTCAAATATTTAGAGATCTTTGCTTGACTATTTATTCTGGCAAGACAGTTGCGTTGGTTGGTGAAAGTGGAAGTGGAAAATCAACTATGGTATCACTGTTACAAAGATTTTACGACCCAGATTCAGGTCATATCACACTTGATGGAATAGATATCCAGAAAATTCAAGTTACATGGTTAAGACAACAGATGGGCTTGGTAAGCCAAGAGCCTATTTTGTTTAATGATACAATCAGAGGCAACATTGCATACGGAAAAGGAACACATGCAACAGAGGCAGAGATTACAGCTGCAGCAGAAATGGCAAATGCCCACAAGTTCATCAGTAGTTTGCAACAGGGTTATGAAACGATTGTGGGGGAAAGAGGATCAAAACTATCTGGTGGACAGAAGCAGCGCGTGGCAATTGCAAGAGCAATAGTGAAGAATCCAAAAATATTACTACTAGATGAAGCCACCAGTGCCCTGGATGCAGAGTCTGAAAAGGTTGTTCAAGATGCACTAGATAGAGTAATGGTGGAACGAACCACAATCATAGTGGCTCATAGGCTATCCACTATTAAGAACGCAGATTTAATTGCAGTGGTTAAGAATGGGGTCATTGTAGAGAAAGGAAACCATGAAACATTGATCAACCATGGTGGCCATTATGCTTCTTTGGTAGCATTGCACACAAGTACATCATAA 3837 0.4251 MKKAEGESSLDLDSDVIASEIKAGSVSDPLAEAVRGTIQNDSEKRKGKDEAKNTIPFYKLFSFADALDYALMIVGTIGAVGNGMANPLMTVVFGSLIDAFGGTSNSQKVVHDVSKLALKFVYLALGSFAGSFLQVSCWIVSGERQCARIRSLYLKTILRQDAGFFDTETNTGEVVGRMSSDTMLIREAMGEKVGQFVQLVASFVGSFVIAFIKGWLLTLVLLSCIPPLVLASAVMSIVIAKVTSRRQVAYSAAASVVEETIASIRTVASFTGEKQAVAKYNQSLLKAYKTGVQEGVASGLGFGSILLIVFCTYALAIWYGGKLILDKDYTAGKIITIIFAILTGSHSLGQTSPSMSSFAAGQAAAYKMFETINRRPDIDAYDTTGRQLDDIRGDIELREVGFSYPSRPDETIFNGFSLFIPSGTTVALVGQSGSGKSTVINLIERFYDPQAGEVLIDNINLKEFNLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIKVAADLANASKFIDTLPQGLDTMIGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESEKTVQEALDKIMINRTTVIVAHRLSTVRNAATIAVIHQGKIVEKGSHSELTKDLEGAYSQLNRLQETNSEAEQNFSVETENLESTTNSSRHSSQRFSFRNSITHVSGVGNIKDDKVALAEDTNSKQPPKIPIRRLAKLNKPEIPVLILGTIAAVANGIILPFFGFMVSKMVNIFYEPADELRKDSRSWAYVFVALGVSAFFINPLRSYFFSVAGEKLVKRMRLICFEKMINMEVSWFDEAEHSSAALGSRLSTDAASIRALVGDALGLMVQNIAAAVAGLVIAFQANWQLSVIILVLLPILALNGILQMKFLQGFTADGKKLYEEASQVASDAVSSSRTVASFCAEEKVMELYKKKCEAPIKAGIKQGIISGVGFGLSFLFLFSVYACSFYAGAKLVGDGKASFSDVFRVFFALNMAAVGMSQTSTLAPDSAKAKSAAASVLAIIDRKSKVDPNDDNGLILENLMGEVEFHHVTFKYPTRPDVQIFRDLCLTIYSGKTVALVGESGSGKSTMVSLLQRFYDPDSGHITLDGIDIQKIQVTWLRQQMGLVSQEPILFNDTIRGNIAYGKGTHATEAEITAAAEMANAHKFISSLQQGYETIVGERGSKLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMVERTTIIVAHRLSTIKNADLIAVVKNGVIVEKGNHETLINHGGHYASLVALHTSTS* 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2301 1278 SUPERFAMILY ABC transporter transmembrane region 59 379 IPR036640 GO:0005524|GO:0016021
Ahy6g2301 1278 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 31 1275 - -
Ahy6g2301 1278 ProSitePatterns ABC transporters family signature. 1176 1190 IPR017871 GO:0005524
Ahy6g2301 1278 Pfam ABC transporter transmembrane region 72 345 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy6g2301 1278 Pfam ABC transporter transmembrane region 714 986 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy6g2301 1278 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 73 360 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy6g2301 1278 Pfam ABC transporter 1056 1204 IPR003439 GO:0005524
Ahy6g2301 1278 Gene3D - 385 634 IPR027417 -
Ahy6g2301 1278 Gene3D - 1026 1275 IPR027417 -
Ahy6g2301 1278 PANTHER - 31 1275 - -
Ahy6g2301 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1024 1273 IPR027417 -
Ahy6g2301 1278 Gene3D ABC transporter type 1, transmembrane domain 59 1002 IPR036640 GO:0005524|GO:0016021
Ahy6g2301 1278 Gene3D ABC transporter type 1, transmembrane domain 1003 1025 IPR036640 GO:0005524|GO:0016021
Ahy6g2301 1278 Coils Coil 615 649 - -
Ahy6g2301 1278 ProSitePatterns ABC transporters family signature. 534 548 IPR017871 GO:0005524
Ahy6g2301 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 387 633 IPR027417 -
Ahy6g2301 1278 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 395 631 IPR003439 GO:0005524
Ahy6g2301 1278 Pfam ABC transporter 414 562 IPR003439 GO:0005524
Ahy6g2301 1278 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1036 1273 IPR003439 GO:0005524
Ahy6g2301 1278 CDD ABC_6TM_Pgp_ABCB1_D2_like 704 1019 - -
Ahy6g2301 1278 SUPERFAMILY ABC transporter transmembrane region 696 1021 IPR036640 GO:0005524|GO:0016021
Ahy6g2301 1278 CDD ABC_MTABC3_MDL1_MDL2 395 633 - -
Ahy6g2301 1278 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 715 1001 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy6g2301 1278 SMART AAA_5 1063 1256 IPR003593 -
Ahy6g2301 1278 SMART AAA_5 422 615 IPR003593 -
Ahy6g2301 1278 CDD ABC_6TM_Pgp_ABCB1_D1_like 72 368 - -
Ahy6g2301 1278 CDD ABC_MTABC3_MDL1_MDL2 1036 1271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2301 Ahy-Chr6 106144894 106150932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2301 55 1277 Calmodulin-binding Proteins AT2G36910 44.275 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2301 K05658 - gmx:100800293 1744.17