LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy6g2295	ATGGAATCACAAGAGACATCTTCAATAGGAGCAGAAGCACTTCTACATATGTCTCCTGGATCAGCGGTTTCTGTTGCATACCACCCTCTGTTTGGACCGCATGATGATCTGATCGTTCTAGAGCTTGATGATAAACTTCTTCCCGATGTTCTGCATGAAAGGGTGGTAATAAGAGGACTGCCCGATGAAGACGCAGTTCTTTGTACTCAATCCAAAACATTTGCAATGAAGTGCGTTGGAACTTCAAATTCTGTTTTGCTTATACCTCCTGCAAATCAATATGTTTTTGATCAAAATCCACAAAATGGTGCAAATAATCACAAGGAGAAAGTTGTTGCACCTGTGATTAAAGTTGTACCTGGTAATATGGAGCTTGTTGAGGTTGCCCCCAGACTTGACAAACTTAAATTGCTCCTCTCGCAGAACCCTTGCAGGCTTGAAGAGTTTGACAGTTCAGAAGTGAATCCAGAAACTAGAGCAGGGTTATATAACTGGAAGGATCTTAAAAACAATATTCAAGCTAGTGACGAGGAACTAAGATCCGGACTGCAGGCACTATCGGCTGTGGAGATTAATAGCTATTGGAGACTAGTAGACGAGAGATACATGAACATGATTCTGGAAATGGTTTTGAGAAATGCAGTGTTAAACGACTGGTCACTGAGTGCTCTTAATGAAGATGAAGTCGTAAGCATGCTGGTTACCGATGGATTTCCTGCAGAACTTGCAAGGCATTGCTTGCACGTATATGGTGAGAAAGTAATTGACGGCACGGATACCTGTGCATGGAAGTTAGACAAGAAGCGGGTTTGCATTCATTTTGCGAGAGAAATCCTGAGAGGGGGCAAGATGAAGCTGGAGAGTTTTATGGATGAGTGGAGGCAGAGGACTCCAGATGAAATGCAGCCAACTTTTGATCTTGTCGAAGGAGAAGTTTTGACAGAGAGAATTGGAGTCGAGACATGGGTCCGTGGATTCAGCGTCTCTTCGTTGCCATCCACTCCGGCTGAACGATTCTCGATTCTTTTCAAAGAGCGGCCAAAATGGGAATGGAAAGATCTGCAGCCTTATATTAGGGATCTGAATGTGCCAGGTCTTACTTCTGAAGGTTTGCTATTGAAATACACTCGAAGAACACAACCATCACCTGAAATAGAACCAATTTTCAGTGCAAGATAG	1179	0.4317	MESQETSSIGAEALLHMSPGSAVSVAYHPLFGPHDDLIVLELDDKLLPDVLHERVVIRGLPDEDAVLCTQSKTFAMKCVGTSNSVLLIPPANQYVFDQNPQNGANNHKEKVVAPVIKVVPGNMELVEVAPRLDKLKLLLSQNPCRLEEFDSSEVNPETRAGLYNWKDLKNNIQASDEELRSGLQALSAVEINSYWRLVDERYMNMILEMVLRNAVLNDWSLSALNEDEVVSMLVTDGFPAELARHCLHVYGEKVIDGTDTCAWKLDKKRVCIHFAREILRGGKMKLESFMDEWRQRTPDEMQPTFDLVEGEVLTERIGVETWVRGFSVSSLPSTPAERFSILFKERPKWEWKDLQPYIRDLNVPGLTSEGLLLKYTRRTQPSPEIEPIFSAR*	393

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy6g2295	392	Pfam	Sister chromatid cohesion protein Dcc1	39	358	IPR019128	GO:0007064\|GO:0031390
	Ahy6g2295	392	PANTHER	SISTER CHROMATID COHESION PROTEIN DCC1-RELATED	6	392	IPR019128	GO:0007064\|GO:0031390

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy6g2295	Ahy-Chr6	106050594	106054986	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy6g2295	10	392	C3H Transcription Factor Family	AT2G44580	55.754	1.64e-159	452