Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2278 ATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGGTGGAGGAATATGAGGTATCTTGATCTAGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCAGCTTAGGGTAAAGCTTGACTATGGCTACGGTATATGGAAGAAGGGTGGATATCATCATGCTGGCTTCACACGCAAAGATTTGTACAACCACATTGATCGTTATCGTCGGTCGAAAGTTAAAAACGGGGATGTCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGCTGTTCTTTGGAAAGTATACGTTCACTAGTGACAAAAGGCTCGAGCATATTTTTTGGGCAGATGGGCAGTCAATTATCAACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCCGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGGCCTACTATCTGACGAAACCACAGAGATGTATAAGTGGTTGTTGGAAACTTTTGTTAAAGCGATGGGTGGGAAAAGTCCTAAAGCTGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTTCCTGATGCGACCCATCGGTTATGCGGATGGCATCTGCAAAGAAATTCATGTGAAAATATAAAGAATCCTAATTTCCTGCGCGATTTTAAATGTCTTATATACGACAACAATGACCAGAGAGACTTTGATCGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGGAGTACCTGGATGGAAAAGACGTACGAAACTCGTGCGATGTGGTCCCATTGTTTCCTCCAGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGCGAAGGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAACGAATTAATAGCTGACTTTAAGTCTCAATTCTCAGAGCCAGTGATAATTACCTTGTTGGAGGAAATTCGTAATGAGATTCAGAGGGCAAGGGCTTTGAATATCAAGGTACTAAGCATAACCTTGGACAAGGTCGAGTTCAGTGTGACTGCTCTCGGAGACCCGGCCAAAGATCGACAAGTGGAAGTCGATAGAGGTAAGAATTTGTTCTCGTGCTCGTGCAAGCTGTTTGAATCACGTGGTATTCTGTGTAGTCATGTCTTCTGTGCCATGAAGTTCGAAAACATACTTGAGTTTCCAGATTCGTTGATCTACAAAAGGTGGACAAAGAATACAAAGAATGAATTTATTAGCACAGAAATGCCTGTGAATGATGACATCGAAAGGGTCTTAAAGTTTCGAGTTGGTGCATTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGTAAGGATCTTGCAGACTTTGATGAAGTCCAGTCTGAACTTGTCAATTTAGTTACCGCCTGCAGTCACGCAAACAAGCATAGTGTGGAAGGTAACCCTCGCGATCGATCAGACGACAATGCATCAGCCAAGGACTCAGGTTTTAGTCCAGAAAGGTTTGCTAATTCTTCGAGGTCGATCTTAGTTAAGTCCAAACACCACTCAGGACCTAAGACCAAGCCTTTTAAAAAGGGTAGAACAAGGAATTTTACGGCGATGGGTATGAGGAACCGGAAGGGTAAAGACAACACTTTTGATGAGTTAATTGTGGTTGACTTTTGGGTAAGGAGTTGCTACCATTGTGATTATGCAATTCAGTTGATCAATTAG 1857 0.4243 MRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDLDDRSREARSLTRTKCPAQLRVKLDYGYGIWKKGGYHHAGFTRKDLYNHIDRYRRSKVKNGDVNAAINYLIGKSNNDPLFFGKYTFTSDKRLEHIFWADGQSIINYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTEMYKWLLETFVKAMGGKSPKAVITDGDLAMRDAIKNVLPDATHRLCGWHLQRNSCENIKNPNFLRDFKCLIYDNNDQRDFDRRWAAILDKHNLVGSTWMEKTYETRAMWSHCFLQDKFFGYIRTTSQCEGINSLIRFYVNRKNTLIDFMHNLDRALKEYRNNELIADFKSQFSEPVIITLLEEIRNEIQRARALNIKVLSITLDKVEFSVTALGDPAKDRQVEVDRGKNLFSCSCKLFESRGILCSHVFCAMKFENILEFPDSLIYKRWTKNTKNEFISTEMPVNDDIERVLKFRVGALASNCNKLCDIACKDLADFDEVQSELVNLVTACSHANKHSVEGNPRDRSDDNASAKDSGFSPERFANSSRSILVKSKHHSGPKTKPFKKGRTRNFTAMGMRNRKGKDNTFDELIVVDFWVRSCYHCDYAIQLIN* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2278 618 Pfam FAR1 DNA-binding domain 8 64 IPR004330 -
Ahy6g2278 618 MobiDBLite consensus disorder prediction 545 559 - -
Ahy6g2278 618 ProSiteProfiles Zinc finger SWIM-type profile. 406 442 IPR007527 GO:0008270
Ahy6g2278 618 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 40 517 IPR031052 GO:0006355
Ahy6g2278 618 MobiDBLite consensus disorder prediction 522 576 - -
Ahy6g2278 618 MobiDBLite consensus disorder prediction 560 574 - -
Ahy6g2278 618 Pfam MULE transposase domain 145 239 IPR018289 -
Ahy6g2278 618 PANTHER OS01G0607050 PROTEIN 40 517 - -
Ahy6g2278 618 MobiDBLite consensus disorder prediction 524 538 - -
Ahy6g2278 618 SMART 26again6 417 444 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2278 Ahy-Chr6 105718923 105721958 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy6g2278 MULE 2.50E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2278 - - ahf:112755379 1035.4