Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2276 ATGGTTAATTGTGTTGATTATGAGGTCAAGAGCACAATGATACTCTTTCTTGCACAACTCTCTGGCAATGATAGTCATCAGAACTTCACTTTGAATTGGAAATTAGGCTCTGATCCCTGCATAGATCAATGGCAAGGTGTAGAGTGTGATACTCAAAACTCATCCATCAAGAATTTGCTTCTTGACAAGCTAAGCTTATCTGGAACTCTTGATGTTGCTATGCTTTGCAACTTGCATCCCCTGGCTGCATCTCTCACTTATCTTAGTCTCGACGGCAACGGCGTCCGCGGAGGCATCCCGGAAGAGATTGGAAGCTGCAAACAACTCACTCAACTACACTTAAGCGGAAACCAACTTTCTGGAACCCTTCCTAGTTCACTTTCCAAGTTAAACAATTTAAAGAGTCTTGATATATCTAACAACAAAATTTCGGGACAGTTACATCCTGATTTGGCTAGAATCTCAACGCTGAATATGTTCCTAGCACAGAATAATCAGCTCAGTGGAGAAATTCCGCCGTTTAATTTCTCTAATTTCGACCGGTTCGATGTCTCCTTCAACAATTTCAGTGGAGTTATTCCAGATATACATGGACATTTCACCTCTGAAAGCTTCCTCGGTAACCCTCAACTCTGTGGTGATCCATTACCAAAGAGTTGCACCGGCTCGCCGGTGCCTGCTAGCAAAGATTCCGAAGAACGGAAGGAATCGCCGGTGCCTGCAGCCGCTGCCGGCGATAATTCTGATGAAGAACCAAAGAAATCATCAAAGGGCCCTTCAAAAGAGCAGATTCTTATGTATTCAGGCTATGCGGCGATTGGAGCTTTAGTGATCCTTTTAATTGTGTGGAAGCTGTGCAGAAGAAAAAAGAAAGAAAAGAGAATTGAAGCATTGAATGAGAAAGTTGTAACTCAAAGTAGTGCTCAAAAAGCTAGCCATGTTTCAAGTGAATACAGAGCAGGAGTAAGCCGATCGGACTTCTCATTAACTTCGGAGAGCGGCATGGTTTCGCAATCACTCGTGGTTCTTTCGAATTCAAGGAATAGTATGCATGAATTGAAATTAGAAGACTTGCTCAAGGCTCCTGCTGAATTGATTGGAAGAGGAAAGAATGGTAGCCTTTATAAGGTGATTCTTGAAAATGGGACAACGGTGGTTGTGAAAAGGATCATCGATAGGTCTGTTCCCGGCCGTGATTTCAAGCAAAGAATGCAGATTTTGAGTCAAGTGAAGCATCCTTATGTGCTCTCACCTCTTGCTTTCTATTGCTCCAAGCAAGAGAAGCTTTTGGTCTATGAATATCAGCAAAATGGAAGTTTATTTAAGCTTCTACACGGTGCCCAAAAATCCTTTGACTGGAGCAGCAGGCTTGGAATTGCAGCTACGACCGCTGAGGCATTAGCTTTCATGCATCAAGAGCTTGGGCAACAAGGTATCTCACATGGCAACCTAAAATCATCCAACATTTTGCTAAACAAGAACATGGAGCCATGCATAAGTGAGTATGGTGTGATGGGTGGAGACGACGACCAACAACAACAACATAGTTCATCTTTTGTTAGTCCTTTCACTTCCATGTCATCATCAGATCACGCCGCCTTCAAGGCCGATGTCTATGGATTCGGCGTCATTCTGCTCGAACTACTCACCGGAAAGTTGGTAAAGAGCGAAGGGATGGAACTGACGGAGTGGGTTCAGTCTGTTGTGAGGGAAGAATGGACGGGTGAAGTGTTTGATAGGACTCTGATATCAGAGTATGCAAGTGAAGAAAGGATGGTGAATTTGCTTCAGGTCGCTATAAGGTGTGTTAATCGTTCCCCTGAGGCTAGGCCAAGTATCAACCAAGTTGCTCTAATCATTAACACTATAAAGGAGGAAGAAGAAAAGTCTTTGATTTATCAAGTGTGA 1908 0.4334 MVNCVDYEVKSTMILFLAQLSGNDSHQNFTLNWKLGSDPCIDQWQGVECDTQNSSIKNLLLDKLSLSGTLDVAMLCNLHPLAASLTYLSLDGNGVRGGIPEEIGSCKQLTQLHLSGNQLSGTLPSSLSKLNNLKSLDISNNKISGQLHPDLARISTLNMFLAQNNQLSGEIPPFNFSNFDRFDVSFNNFSGVIPDIHGHFTSESFLGNPQLCGDPLPKSCTGSPVPASKDSEERKESPVPAAAAGDNSDEEPKKSSKGPSKEQILMYSGYAAIGALVILLIVWKLCRRKKKEKRIEALNEKVVTQSSAQKASHVSSEYRAGVSRSDFSLTSESGMVSQSLVVLSNSRNSMHELKLEDLLKAPAELIGRGKNGSLYKVILENGTTVVVKRIIDRSVPGRDFKQRMQILSQVKHPYVLSPLAFYCSKQEKLLVYEYQQNGSLFKLLHGAQKSFDWSSRLGIAATTAEALAFMHQELGQQGISHGNLKSSNILLNKNMEPCISEYGVMGGDDDQQQQHSSSFVSPFTSMSSSDHAAFKADVYGFGVILLELLTGKLVKSEGMELTEWVQSVVREEWTGEVFDRTLISEYASEERMVNLLQVAIRCVNRSPEARPSINQVALIINTIKEEEEKSLIYQV* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2276 635 Pfam Leucine rich repeat N-terminal domain 16 50 IPR013210 -
Ahy6g2276 635 PANTHER OS05G0588300 PROTEIN 5 633 - -
Ahy6g2276 635 Gene3D Ribonuclease Inhibitor 175 223 IPR032675 -
Ahy6g2276 635 MobiDBLite consensus disorder prediction 217 260 - -
Ahy6g2276 635 PRINTS Leucine-rich repeat signature 109 122 - -
Ahy6g2276 635 PRINTS Leucine-rich repeat signature 130 143 - -
Ahy6g2276 635 Gene3D Ribonuclease Inhibitor 10 174 IPR032675 -
Ahy6g2276 635 SUPERFAMILY Protein kinase-like (PK-like) 363 617 IPR011009 -
Ahy6g2276 635 Pfam Protein kinase domain 364 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2276 635 ProSiteProfiles Protein kinase domain profile. 360 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2276 635 Pfam Leucine rich repeat 84 143 IPR001611 GO:0005515
Ahy6g2276 635 Gene3D Transferase(Phosphotransferase) domain 1 436 634 - -
Ahy6g2276 635 SUPERFAMILY L domain-like 30 206 - -
Ahy6g2276 635 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Ahy6g2276 635 Gene3D Phosphorylase Kinase; domain 1 328 434 - -
Ahy6g2276 635 PANTHER OS10G0387400 PROTEIN 5 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2276 Ahy-Chr6 105647435 105649945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2276 33 624 Receptor kinase-like Gene Family AT1G68400 35.008 8.26e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy6g2276 Pkinase 3.80E-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2276 - - aip:107605318 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2660 16 138415971 138418866 Ahy6g2276 6 105647435 105649945 hybridization