Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2264 ATGTCCTTCAATCAATCAAAATCCGACAAGAGTGACGCTGTGTACCGAAAATCCGGGCGATCCGCCAGCTTCAATCAGCAGCGAGGCTCCTCCGGCGGTGCATACGGCAGGGGCGGCAGCGGTGGCGGTGCCGCACCTTCTCCGTCACTATCCTCGAGCCGCAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTACCGTAGCAAGTTCAACCGAGTCTAGTAGTACTAATGCAAACCGGACCATACCAAATGGTAGCCATGTTCAGCCTCAATTTCATGGAGGATCTGATGCACCAGTTACCAATGCAACTATCAAGTCACCCGAGTCAAATGCCCAGAGAAGCACCAGAGCTATTCCAAAAGCTCCTACTTCTCAACCTCCCACCTTGAGTTCTGATTCAGCTCCTCCGACAACCCCTGCTAAGGGAGATGCATCCAAGGCTTTCCCTTTCCAATTTGGATCTATTAGTCCTGGTTTTATTAACGGAATGGCAATTCCTGCTCGCACAAGCTCAGCTCCACCCAATTTAGATGAGCAGAAGCGTGATCAGGCTCGCCATGATTCTTTTAAACCTCCAGCACCGGCACCGGCACCTCCTGTTCCAAAGCAGCACTCAGTGAGGAAGGATATAGGTAATAATGATCAATCTAATGCTGGGACTCGGGCAAAAAAAGATATGCAGTTGTCATCATTGCCTCCAGGAAGCCAGATGCAGAAACCTTCAGTTGTTCCTTTAAGTGGAATTTCAATGGCAATGCCATATCATCAGCCACAGGCATCTGTACAGTTTGGCAGTCCCAATCCGCAGATTCAGTCTCAGGGTATGCCAACAGCACCTCTACAGATGCCTTTACCAATGCCTTTGCCAATTGGAAATGCTCCACAAGTGCAGCAACAGGTCTTTGTTCCAGGCCTTCAACCACACCAGATGCATCAAGGACTCATGCATCAGAGCCAAAACATGAGTTTTACTCCTCAACTGAGCCCTCAATTGCCCCATCAGTTAGGTAGCATGGGTCTAAGCATTGGCCCACAATATTCCCCACAGCAAGGAGGAAAATTTGCTCCTCGTAAAACTACTCCTGTCAAGATAACTCATCCTGAGACCCATGAGGAGCTTAGGCTTGATAAAAGGGCAGACACATATTCAGATGGTGGGTCATCTGGTGCTAAATCTCATGCTACTGTGCCTTCTCAGTCTCAACCTGCCCAGCCATTTACAGTTTCTCATCCTATTACTTACTATCAACCCAATTCCTATAGTGCAAGTTCTGGCTTTTATCCACCTGCTAGTTCTCTTCCATTAACAAGTAGTCAGATAACTCCAAATTCTCAACCACCAAGGTTTAGTTATGCAGTGAGCCATGGTCAGCAAAATGTTGGTTTCATGAATTCATCATCTCATAATTCGATACCTGTTAATAAAGTTGGCACTCATATCCCTGCCATTACTGAACCACCTGCTCCAGAATTTTCCCACAATGTGCTTAATGCTATCTCACCATCATCAGGAGCAACATCTATGTCTATTAAAGATAGTAGTGGGACTGGTCTTGTGGACTCCTCAGTTGCCAATTCCAATATTTCTAGTGCCCGAAGGAGTCACTCTGCTAGATCTTCAGTAGCATCTGGTGATGCTAACTCCTCTTTGCCACAAAAAGGTTCTGAAATTTGCTCTGAAGTTTCTTTGGAACAGTCTAAGTTATCCAGTGATTCTTCAGTTTTGAACTCACTGCCAAAACAATCTTCTGCATCTACTGAGGTTACAGCTGCTCCTTTGAAGTCTTCCTCCGCTGTGAGTGCTGAGTCTGTTTCAGTTGTGTCTAATGATGAAGAAAAGGGGAAGGAATTTCTCAGTAGGTCAAATTCTTTGAAAGATAATCAGAAGGTACAGAAGAAAGGCGAATTACAACATCAGGTTGCCGTACAATCTCCTACTGTAGCTGATGTCCCTTCCCAAGCTGTTGAGAGATCTTCAGTCATATCTGAAACTGTAGGAACTAAAACAAACCATTCTGCCGCAGTGACCAGTGAAGATGTAGCAGCAGCAACAGCTGCGGATGAAGACATGCTATTAACTCCCTCTGTTAGTATGTCTCATGCTGAAGTGAAAAGCAATGGCACTACAGAACTTTCTGTTTGTGTTTCAGCTGAAGGGCCTGTCGCTCAAACTGGCTATAGTTTGAATAACAATGATGAGCTAGATGAATTTTTGCAAGAGGATAAACTGTCAAAGGATAAAGTTTCAGAAATGGGTGAAAAAACTGAAATATCATCTATTCAAGGTTCCAAACAAGAACATGATGAATCTACAAGCTGTGTTCCAGAATGTGAAAGGACAAGTGATAGTTTAGTCATGTCTACCTGTAGTGCATTGGGTTCTCCTAGAGATGTCTCATTGAGTAGAGATGATATTGCAGTCAATAGTGGAGCTGTTTCCGCAAGTTCTGGCACATTAGACCAGCATTCTGCTGATGTTCCAGAAACAACTTCAAAACATTTGAAAGATAGTTTAGAGATTGCTGAAAGTGTGGTTTCTCTTCCAGCGCCAGGTACTAAGGATAGACCAATTTTGGAGCAAAATAAGGTTAAAACTACTAAGGGGAAAAAGAAAAGGAGAGAGATTCTTCAAAAGGCCGATGCTGCTGGATCAACCTCTGATCTTTATAATGCGTACAAGGGACCTGAGGAAAAGAAGGATGCTGTTGTAAGTGCAGAGAAAGAGGACAGCGTTTCTACTTCTGGAAGTTTAGAGCAGTTTTCTACTGGTGCTGCTCAGCGAGATTGTATAACGAGTGAGCATAAAGCCGAGCTTGATGATTGGGAGGATGCTGCTGACATGTCTGCACCAAAACTTGAAGTTTCAGATCAAACTGAACAGGTTACTGACAGTTGTATAGTTACAATGAAAAGGTACTCTCGAGATTTCCTTTTGAAGTTTGCAGAGCAGTGCACAAATCTTCCTGAAGGATTTGAAATCACAGCTGACATAGCTGAGTCTTTGATGGGTGCCAATGTTAGTAGTTCACGTGATCCACATCCTTCTCCTGGAAGGAATATAGATAGGACTGGTGGGATGTCTAGGATAGATCGGCGTGGAGGTGCTATTACTGAGGAAGACAAGTGGAGCAAAGTTTCCAATGCTTTTCATTCAGGTATGCGTTTGGATGGTATTGGAGGTAATGCAGGATTTCGTCCAGTTCAAGGAGGCAATTTCGGTGTCTTAAGGAATCCTCGCTCACCTCTGCCATATGCTGGAGCTGGAGGGATTCTTTCTGGGCCAATGCAATCCATGGGCAATCTGGGAGGAATGCCAAGAAACAGCTCTGACAGTGACAGGTGGCAGCGTGCTTCTAGCTTCCAGCAAAGGGGTTTGATTCCTTCTCCTCAAAGTCCTTTGCAGATGATGCACAAAGCTGATAAGAAGTATGAGGTCGGTAAAGTGACAGATGCGGAAGAGGCCAAGCAGAGGCAATTGAAAGCTATATTGAATAAGTTAACTCCTCAGAATTTTGAGAAGCTTTTTGAGCAGGTAAAAGCAGTTAACATTGACAATGCAGTAACTCTCACTGGTGTCATCTCACAAATATTTGAGAAGGCTTTGATGGAACCTACCTTCTGTGAAATGTATGCCAATTTCTGTTCACATCTGGCAGCTGATTTGCCTGATTTTAGTGAAGACAATGAGAAGATAACTTTTAAGAGGTTATTATTAAACAAGTGCCAGGAAGAATTTGAGAGGGGTGAAAGAGAACAGGAAGAGGCTGACAAGGCTGATGAAGGTGAGATCAAGCTGTCTAATGAAGAAAGGGAGGAGAAAAGAACCAAAGCAAGAAGACGCATGCTGGGTAATATCAGATTGATAGGAGAACTGTATAAGAAGAGAATGTTGACAGAGAGGATTATGCATGAGTGCATCAGGAAGTTATTGGGTCAGCATCAGGATCCGGATGAAGAAGATATTGAAGCTTTGTGCAAGCTCATGAGTACAATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAGCATATAGATGTGTATTTTGAACGGATGAAATCATTATCAAACAACATGAATTTATCTTCAAGGGTGAGGTTCATGTTGAAAGATGCCATTGATTTAAGAAAGAACAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTACATAGAGATGCTACCCAAGAGCGGCAGGCCCAAGCTGGTAGGCTGGGTCGTGGTCTGGGCAATAATCCAGTAAGAAGAAACCCCATGGATTTTGGTCCAAGAGGGGCATCTATGTTACCTTCACCTGTTGCCCAAATGGGTGGAGTACGAGGGTTGCCTACTCAAATTCGCGGATATGGTCCACAGGATGTTCGTATGGATGATAGGCATGAGACAAGAATCCTATCAGTTCCACTGAGTCAAAGACTTGGTGATGATTCAATTACCTTGGGACCCCAAGGGGGTCTTGCTAGAGGAATGTCCATAAGAGGCTCAACCGCAGTTTCAAGTTCAGGAAGTCTTAATGGTTATAGTAATTTGCCAGAGGGCTCAGCATACAGTTCTAGGGAGGACCATGCTCCAAGATATATTCCAGATAGATTTGGTGCTCCGACCGCGTATGATCAACCCAGTGCTAAAGAGAGAAATATGACTTATGGTAACAGTGACATGAGAAATGCAGATAGGAATTTTGACAGACCTGTTCTAACTTCACCTTCCTCTCAACTGCAAGGGACAGTGGTCTCCCAGAATCCTTCTTCAGAAAGGATTTGGCCAGAAGAACGATTACGAGACATGTCAATGGCTGCAATAAGAGAATATTATAGTGCTAGGGATGAGAAGGAAGTTGTTTTGTGTGTTAAAGATTTGAACAATCCAAGCTTCCATCCTTCCATGGTCTCGATTTGGGTCACAGACTCTTTCGAGAGAAAGAACACAGAGAGAGATCTTCTGGCTCAGCTACTAGTCAACCTTGTGAAGTCTCAGGATGGTACCTTGAGTCCAGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTTAGTACTTTGGAAGATGCGGTTAACGATGCTCCGAAAGCACCGGAGTTTCTTGGCCGCGTATTTGCCAAAGCTATAACAGAGCATGTAGTCTCTTTGAATGAGATTGGACAGTTAATACATGAGGGTGGAGAGGAACCTGGCAGTCTCTTAGAAGCGGGACTCGCAGCTGATGTTCTTGGAAGCACCTTGGAGGCCATACAAATGGAGAAAGGCGATACAGTTTTAAGTGAGATCCGGACAAGCTCAAATTTGCGGTTGGAGACTTTCCGGCCGCCGGAACCTTTGAAATCAAGGAAGTTAGAGAACTTTATTTAG 5379 0.4426 MSFNQSKSDKSDAVYRKSGRSASFNQQRGSSGGAYGRGGSGGGAAPSPSLSSSRSFNKKSNNAQGGQSRVNPTVASSTESSSTNANRTIPNGSHVQPQFHGGSDAPVTNATIKSPESNAQRSTRAIPKAPTSQPPTLSSDSAPPTTPAKGDASKAFPFQFGSISPGFINGMAIPARTSSAPPNLDEQKRDQARHDSFKPPAPAPAPPVPKQHSVRKDIGNNDQSNAGTRAKKDMQLSSLPPGSQMQKPSVVPLSGISMAMPYHQPQASVQFGSPNPQIQSQGMPTAPLQMPLPMPLPIGNAPQVQQQVFVPGLQPHQMHQGLMHQSQNMSFTPQLSPQLPHQLGSMGLSIGPQYSPQQGGKFAPRKTTPVKITHPETHEELRLDKRADTYSDGGSSGAKSHATVPSQSQPAQPFTVSHPITYYQPNSYSASSGFYPPASSLPLTSSQITPNSQPPRFSYAVSHGQQNVGFMNSSSHNSIPVNKVGTHIPAITEPPAPEFSHNVLNAISPSSGATSMSIKDSSGTGLVDSSVANSNISSARRSHSARSSVASGDANSSLPQKGSEICSEVSLEQSKLSSDSSVLNSLPKQSSASTEVTAAPLKSSSAVSAESVSVVSNDEEKGKEFLSRSNSLKDNQKVQKKGELQHQVAVQSPTVADVPSQAVERSSVISETVGTKTNHSAAVTSEDVAAATAADEDMLLTPSVSMSHAEVKSNGTTELSVCVSAEGPVAQTGYSLNNNDELDEFLQEDKLSKDKVSEMGEKTEISSIQGSKQEHDESTSCVPECERTSDSLVMSTCSALGSPRDVSLSRDDIAVNSGAVSASSGTLDQHSADVPETTSKHLKDSLEIAESVVSLPAPGTKDRPILEQNKVKTTKGKKKRREILQKADAAGSTSDLYNAYKGPEEKKDAVVSAEKEDSVSTSGSLEQFSTGAAQRDCITSEHKAELDDWEDAADMSAPKLEVSDQTEQVTDSCIVTMKRYSRDFLLKFAEQCTNLPEGFEITADIAESLMGANVSSSRDPHPSPGRNIDRTGGMSRIDRRGGAITEEDKWSKVSNAFHSGMRLDGIGGNAGFRPVQGGNFGVLRNPRSPLPYAGAGGILSGPMQSMGNLGGMPRNSSDSDRWQRASSFQQRGLIPSPQSPLQMMHKADKKYEVGKVTDAEEAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLAADLPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEADKADEGEIKLSNEEREEKRTKARRRMLGNIRLIGELYKKRMLTERIMHECIRKLLGQHQDPDEEDIEALCKLMSTIGEMIDHPKAKEHIDVYFERMKSLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDATQERQAQAGRLGRGLGNNPVRRNPMDFGPRGASMLPSPVAQMGGVRGLPTQIRGYGPQDVRMDDRHETRILSVPLSQRLGDDSITLGPQGGLARGMSIRGSTAVSSSGSLNGYSNLPEGSAYSSREDHAPRYIPDRFGAPTAYDQPSAKERNMTYGNSDMRNADRNFDRPVLTSPSSQLQGTVVSQNPSSERIWPEERLRDMSMAAIREYYSARDEKEVVLCVKDLNNPSFHPSMVSIWVTDSFERKNTERDLLAQLLVNLVKSQDGTLSPAQLIKGFESVLSTLEDAVNDAPKAPEFLGRVFAKAITEHVVSLNEIGQLIHEGGEEPGSLLEAGLAADVLGSTLEAIQMEKGDTVLSEIRTSSNLRLETFRPPEPLKSRKLENFI* 1793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 18 33 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 1 249 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 393 413 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 900 914 - -
Ahy6g2264 1792 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 65 1782 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 371 389 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 894 927 - -
Ahy6g2264 1792 Coils Coil 1246 1266 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 616 636 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 355 413 - -
Ahy6g2264 1792 SUPERFAMILY ARM repeat 1600 1782 IPR016024 -
Ahy6g2264 1792 SUPERFAMILY ARM repeat 1159 1388 IPR016024 -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 1255 1283 - -
Ahy6g2264 1792 Gene3D - 1600 1792 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 1507 1562 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 1507 1527 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 536 615 - -
Ahy6g2264 1792 Pfam MIF4G domain 1164 1386 IPR003890 GO:0003723|GO:0005515
Ahy6g2264 1792 Gene3D - 1164 1399 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 45 146 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 218 249 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 752 781 - -
Ahy6g2264 1792 Pfam MA3 domain 1609 1717 IPR003891 -
Ahy6g2264 1792 SMART ma3_7 1605 1719 IPR003891 -
Ahy6g2264 1792 SMART if4_15 1164 1386 IPR003890 GO:0003723|GO:0005515
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 1389 1410 - -
Ahy6g2264 1792 ProSiteProfiles MI domain profile. 1604 1728 IPR003891 -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 536 636 - -
Ahy6g2264 1792 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 65 1782 IPR045208 GO:0003743
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 762 776 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 1013 1042 - -
Ahy6g2264 1792 MobiDBLite consensus disorder prediction 1389 1429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2264 Ahy-Chr6 105486917 105496121 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2264 1 1791 Eukaryotic Initiation Factors Gene Family AT3G60240 44.928 0.0 1277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2264 K03260 - gmx:100796636 2391.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2645 16 138207654 138216899 Ahy6g2264 6 105486917 105496121 hybridization
Ahy19g1159 19 21543798 21557450 Ahy6g2264 6 105486917 105496121 PCT
Ahy9g0904 9 16385075 16398393 Ahy6g2264 6 105486917 105496121 PCT