Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2244 ATGACCCCAGGTAGAGTAAAATTAAGCTCATGGTTCATGCAGTTCGAGTACTCGACGTTAGAGAGAGCAACCAATGTTTTCAATGAATTCCATAAACTTGGTGAAGGGGGATATGGTGAAGTTTACAAGGGAACCTTACAAGACGGAAGAGAAATAGCGATAAAGCGTTTCTTTTTGAGTGGAAAGCAGGGAAAACAAGAAGTTTACAATGAAATTGATGTATATGGCAAAGCTCAACACAAGAATCTAGTTCGTTTCCTTGGCTGCTGCTTCACCTCCACAGAAAGTTATCTGGTTTTTGAATTCCTTGCAAACAAAAGCCTTAACTGCATCTTGTTTGACCCGGAGAAGAAGAAGCAGTTGGATTGGCCAAAGAGGCATGGTATAATCCTTGGCGTAGCTGATGGATTGGAACATCTGCATAACAATTCTGAAGGGCCAATAATTCATAGAGACATCAAAGCCGGAAACATTTTATTAGACTTGAAATATAGACCAAAGATCTCTGATTTTGGCTTAGCAAAGTTGAAGTCCTATGACTCTACATCTATTGTAGGCACATTGGGGTATATGGCACCAGAATACCTTGCTGGTTGTTCCATAACAGAAAAAGTAGACGTTTACAGCTTTGGAATATTAGTGCTTGAAATTATCAGTGGAGTGGAGAATGCAAAATTTGAGTCTACTGAAGAAACATTTGAAACTCTTGTTTCTCATGCATGGAAGCATTTCAAATCAAACACCACGTCAAAAATTATTGATGAAAGCATGGAAAATCAAGATCTTGAAGAAATTACAAGAGTTATCCATGTGGGACTTTTGTGCACACAAGAGTTGCCGTACCTGCGTCCCAGCATGACAGAGGTGGTAGCAATGCTTAGACAGAAGGATGTTGTAATGCCATTACCTTCCAAACCTCCATTCACTGTTGATTCTTTCGAATTTCCACAAGAAATAGAATCTAGTTGGGAATCAAAAGGTTTAGATAATTCAGAATTGACAGTGCCTTTAAATTTTGGAGAAAGAAGTGTGTAA 1035 0.3884 MTPGRVKLSSWFMQFEYSTLERATNVFNEFHKLGEGGYGEVYKGTLQDGREIAIKRFFLSGKQGKQEVYNEIDVYGKAQHKNLVRFLGCCFTSTESYLVFEFLANKSLNCILFDPEKKKQLDWPKRHGIILGVADGLEHLHNNSEGPIIHRDIKAGNILLDLKYRPKISDFGLAKLKSYDSTSIVGTLGYMAPEYLAGCSITEKVDVYSFGILVLEIISGVENAKFESTEETFETLVSHAWKHFKSNTTSKIIDESMENQDLEEITRVIHVGLLCTQELPYLRPSMTEVVAMLRQKDVVMPLPSKPPFTVDSFEFPQEIESSWESKGLDNSELTVPLNFGERSV* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2244 344 Pfam Protein kinase domain 27 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2244 344 Gene3D Transferase(Phosphotransferase) domain 1 103 306 - -
Ahy6g2244 344 Gene3D Phosphorylase Kinase; domain 1 4 102 - -
Ahy6g2244 344 ProSiteProfiles Protein kinase domain profile. 27 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2244 344 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 10 324 - -
Ahy6g2244 344 ProSitePatterns Protein kinases ATP-binding region signature. 33 55 IPR017441 GO:0005524
Ahy6g2244 344 SUPERFAMILY Protein kinase-like (PK-like) 10 321 IPR011009 -
Ahy6g2244 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Ahy6g2244 344 SMART serkin_6 27 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g2244 344 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 43-RELATED 10 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2244 Ahy-Chr6 105034122 105036834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2244 10 313 Receptor kinase-like Gene Family AT4G28670 59.365 6.80e-128 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy6g2244 Pkinase 7.50E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2244 - - ahf:112697305 697.197