Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2222 ATGGCTAGGAGCTGGCTTATTGACATAGGTGGATTTGCAAAGAAAGTGAAAAGCACTAATTTATCTCCAGCTGATCAAATCAAAGATTGTGGGGCATATCGTGATTGTCCAAACTGCCATTACCGTATTGATAACCGTGATGTTTCTACTGAGTGGCCTGGCTTTCCTCTTGGTGTGAAGTTTGATCCTTCTGATGTAGAACTCCTAGAACATTTAGCAGGAAAATGTGGCATTGGAAATGCTCAGCTGCATATGTTTATTAATGAGTTCATTCCAACAATAGAAGAAGAAGAAGGTATTTGCTATACACATCCAGAAAATCTTCCAGGTGTCAAGAAAGATGGGAGCAGTGCCCATTTCTTTCACAGAACAACCAATGCCTATACTACTGGTCAACGGAAGCGTCGAAAGATTCATCATGAATGTTTGACTGAAGAGCATGTACGGTGGCATAAGACTGGTAAGACAAAAGCTATATTGGAGGATGGAGTGCATAAGGGCTTTAAGAAGATCATGGTTCTTTATATAAGACCTAAGAAAGGGTCCAAACCTGATAAAACGAATTGGGTGATGCACCAATACCATTTAGGAACTGATGAAGAGGAGAAGAACGGTGAATATGTGGTTTCAAAGATTTTTCAGAAGCAAACTGAGAAAAATGAGGAGAATCCAGGGGTCGAAGATTCTGACCAGACTGAGAAAAATGAGAATCGATTGGCTGATGATTCCAACTGTATAGCATCCCGAACCAGTCCTAGAACTCCGAAACCAAATCCCCCAAATCCACCTCGAGCTGGAAATTTTGTTGACAATGATGATAATATTGACGAAACTGAACTTCCATTCACTCAGGATGTGAAATGTGTCCCACTATGTGATGTTCTGGATCAGAACAGTGCTGGTGACCCTGCATGGCTGGCAGGTGAATCGCAGGCTGTGGAAAACTTCGACTTTGATGGCTTGGATGACATCTTGTTCTGCAATGAAATATTTGATTCATCATCTCTACTAGATGTTTCTGGAACGGAAACCATGATAAATGGATCTGCTTCAAACGATATGCTTGGGAATGATAGTTTATCATACGGAACTTCCGTTCTTGATACCCTTGACTTGGGTACTCCCCCAGATTTTGATCTTTCAAATCTGAATTTTTACTCTCAAGATAGTATTTTCGACTGGGTCGACAGATTATGA 1197 0.4094 MARSWLIDIGGFAKKVKSTNLSPADQIKDCGAYRDCPNCHYRIDNRDVSTEWPGFPLGVKFDPSDVELLEHLAGKCGIGNAQLHMFINEFIPTIEEEEGICYTHPENLPGVKKDGSSAHFFHRTTNAYTTGQRKRRKIHHECLTEEHVRWHKTGKTKAILEDGVHKGFKKIMVLYIRPKKGSKPDKTNWVMHQYHLGTDEEEKNGEYVVSKIFQKQTEKNEENPGVEDSDQTEKNENRLADDSNCIASRTSPRTPKPNPPNPPRAGNFVDNDDNIDETELPFTQDVKCVPLCDVLDQNSAGDPAWLAGESQAVENFDFDGLDDILFCNEIFDSSSLLDVSGTETMINGSASNDMLGNDSLSYGTSVLDTLDLGTPPDFDLSNLNFYSQDSIFDWVDRL* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2222 398 ProSiteProfiles NAC domain profile. 55 215 IPR003441 GO:0003677|GO:0006355
Ahy6g2222 398 Pfam No apical meristem (NAM) protein 56 196 IPR003441 GO:0003677|GO:0006355
Ahy6g2222 398 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 396 IPR044799 GO:0003700
Ahy6g2222 398 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 1 396 - -
Ahy6g2222 398 SUPERFAMILY NAC domain 40 215 IPR036093 GO:0003677|GO:0006355
Ahy6g2222 398 MobiDBLite consensus disorder prediction 215 276 - -
Ahy6g2222 398 Gene3D NAC domain 65 220 IPR036093 GO:0003677|GO:0006355
Ahy6g2222 398 MobiDBLite consensus disorder prediction 215 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2222 Ahy-Chr6 104660379 104664561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2222 33 213 NAC Transcription Factor Family AT4G28500 56.831 1.25e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy6g2222 NAM 2.70E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2222 - - gmx:100794879 533.872