Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2189 ATGTCATTAATTGAAATTGATTTTCACAGATGGAATCTTGCAATGTCTGCAGATGTGCACAGCATGATAAGGGATAGGAATGGAGAGCATGGGTGTAATGAGGATTTCGACGATGCATGTGATGTCGGTGCCGCAGACATTGTATCTGATGAGGATGCATCAGACTACGGTAACGTTATCAGATTGAGTGACCAACAGATAATGACAAAGGTGTTTCGGAGTGAGGAACGTGCCGATGAATTTTATTGTAAATTTGGAAGATGTCATGGATTCGGTGTGCGCAAGGGAGATTATGGCAAGGATGACCATGGAAATTTGATACGAAGAAGATTCTTTTGCAATAGGGCAGGATTGAGAGATGAAAAATACCTTCATAGATTGGATAGACAAAGGGGTCACCGACCTGAAACACTGACTAATTGTATGGCGAAGTTGTCGATTTACCTAGATAGGGAAAACTCAGTATGGAAGGTTCGAAAAGTTATCTTGGAGCATAATCATGAGTTGACACCGCGAGTAATGGTGCACATGATTCCAAAATTTCGTCAGATGTCAAATGCTGCAAAGGCACACACAGACGGCATGCATGGGTATGGTGTACCTATGTCTAAGATTCTCGGCTATATGGCTGGGATTGCCGGAGGATATTCTTTGTTGGGGTTTACGAAAAAAGATGCATATAACTACATCGACAAGATGCGTTGTTCAAAGATTACTGATGGTGACTCAAATGCTGCCATTGTATACCTAGAGGGAAAGGTGGCAGCCGATCCAATGGCGATGGCTAGGTTTAACTTAACAGAGGATGGTATGTTAGCGAATATGTTCTGGGCTGATGGAATTAGTAGAGTCGACTACCAGTACTTCGGAGACGTCATTGCTTTTGACTCGACATACAAAAAGAATAAATACAATAGACCTTTGGTGATATTCTCCGGCTTAAACAACCACAAGCAAACTACGATATTTGGTTTTGGATTGGTTCTAAATGAAACTATTGCATCATACACATGGATGTTGGAGAATTTGTTGGAGGTTATGTGTAATAAACCTCCGTCCGTTGTCGTAACCGATGGGGACGATACAATGATTGCAACAGTGAAAAAGGTTTTTTCTGAAGCCACCCACCGGTTGTGTGCATGGCATTTGCAGAAGAATGTTACTTCAAATGGAAGTGAGCAAATGTTTCGTGAAATATTCTCTAAGTGGCTATATGCGGACATGGAGGTTGACGAGTTTGAGTTCCAATGGGATCAAGCTGTTGGCGAGTACGGTTTACACCAAAAATGTTGGGCAACACAGATGTATGAAAAGAGGCACATGTGGGCAAGCGCATACCTACGCGGAAAGTTTTGTGTTGGATACTGGACCACATCTAGATGTGAGGGGATAAATTCTCATGTCAAGAAATTCCTAATATCGAGACACAGTATTGTGAACCATGTGCAAAATATATGGAGTTGGTGGTCTGTGAATACCGTAACAAAGAGTTGGTTGCACAGTTCACTTCGATGTACAGTACTCCAGTCTTCACAACATGTTTGGATCCTATTGAGAAGTGTGCTGCAGCTGTCTACACTAGAGCAATATTTATGCAAGTTAAGAGAGAGATTGATGGTATATGAGGCCTTAATTTTGTGA 1641 0.4174 MSLIEIDFHRWNLAMSADVHSMIRDRNGEHGCNEDFDDACDVGAADIVSDEDASDYGNVIRLSDQQIMTKVFRSEERADEFYCKFGRCHGFGVRKGDYGKDDHGNLIRRRFFCNRAGLRDEKYLHRLDRQRGHRPETLTNCMAKLSIYLDRENSVWKVRKVILEHNHELTPRVMVHMIPKFRQMSNAAKAHTDGMHGYGVPMSKILGYMAGIAGGYSLLGFTKKDAYNYIDKMRCSKITDGDSNAAIVYLEGKVAADPMAMARFNLTEDGMLANMFWADGISRVDYQYFGDVIAFDSTYKKNKYNRPLVIFSGLNNHKQTTIFGFGLVLNETIASYTWMLENLLEVMCNKPPSVVVTDGDDTMIATVKKVFSEATHRLCAWHLQKNVTSNGSEQMFREIFSKWLYADMEVDEFEFQWDQAVGEYGLHQKCWATQMYEKRHMWASAYLRGKFCVGYWTTSRCEGINSHVKKFLISRHSIVNHVQNIWSWWSVNTVTKSWLHSSLRCTVLQSSQHVWILLRSVLQLSTLEQYLCKLRERLMVYEALIL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2189 546 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 66 496 IPR031052 GO:0006355
Ahy6g2189 546 Pfam MULE transposase domain 292 386 IPR018289 -
Ahy6g2189 546 Pfam FAR1 DNA-binding domain 80 170 IPR004330 -
Ahy6g2189 546 PANTHER OS02G0262500 PROTEIN 66 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2189 Ahy-Chr6 103954020 103955660 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy6g2189 MULE 5.50E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2189 - - ahf:112701370 618.616