Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2169 ATGGATCTTGCACAGAAGAAGCAGTTGCTAGCCATCGTAGGAACAATAACACAGAGCGAAGCATCTTTGGCAACTGAAATTAATAACGCCACAAAAAACACCCCTATATTATCTCTATCTTCGTTTGCACCCATCACAGAGTTACCCTCTTCTCCATTCCCACAACTAATCCAACTCGGAGATGATATCAACATTCAGATGCAATGCCTTGCAGCCATTGTAGGACACTTCAAGTGGAAAAAAGTGACAACAATATATGAAGTTAATAGCAGGTTTTCTTATGATCCAGGTGTACTAATTTCCCTCTCCAATTCTCTTCGCCATGTTGGATCTGAGATCGTTAACCAGTTAGCATTTCCTTCCTTGTCTTTGCAATCTAGAATCGAAAATGAGCTTAACCAACTCAAGAAGAAGAGTAACAGGGTCTTCTTGATTGTGCACTCTTCTTTAGAGTTGGCTAGCGTGCTTTGCAAGAAAGCAAAACAAATGGGTTTGATGGAGAAAGGATATGTATGGATCATCCCCAACGAGGTTGCTTCCCTTCTTGATTCGGTTAACTCTTCAGTTATCTCTACCATGCAAGGTGTTATTGGATTCAAAACACATTTTTTGGAAACTACCAAACCATATAGAAAGTTCGGGTTCAGATTTCGTAGAAGGTTTGCTCAAGAGTACCCTGAAGAAGAAGAGAACAACACTCCAAGTGTTTTCGCACTTCGAGCTTATGATGCAGCTATTGCTATTGCTAAGGTTACAAACAAGTCACAAGGAAAGTTCAACATGAAAGAATTCCTTGATGAAAATTTACATCAATCTTCAACCTTCACCATAATTAATGTGATAGGAAAAAGCTATAGAGAAATGGCAGTTTGGTCTCCAACACATGGTTTTTCCAAGAACTTTGTTGAACATGAGAAAATGGAGGTAAATAAATCTAACGGTTATGGTGGAGTTGTTTTGAGTAATATTTATTGGCCTGGAGATTTACACTCAGTTCCAAGGGGATGGACCAATAGTAATGAGGAAATGCCACTTAAAATAGGAGTACCTGCAAATGATGCCTTTGCTCAGTTTGTGAATGTCACCTATGGTGACAGCAAGCATGCAACTTCCATAACTGGTTTTTCAATCAATGTCTTCAAAGCAGCTATTAAGAATCTTCCATATCACTTGCACTATGATTTTGTTCCCTTCAATGGCTCCTATGATGAAATGGTTAATCAAGTTAACAATAAGACATTAGATGCTGCAGTTGGAGATATATCAATATTGGCATATAGATATCATTTAGTTGAGTTCTCACAACCATATATTGACTCTGGACTTAACATGGTGGTCGTTGAGAAGCCCAATAAATCAAAACAAACATGGATGTTTATGGATGCATTCACAAAAGAGATGTGGTTGATGATGGCAGCAATGCACGTTTTGGTTGGATTTGTCATTTGGTTGATTGAACGCGAAGAAAATGAAGAACTACAAGGGCTGGGGGCGATGCTTTGGTTTTTAGTCACTGTAATATTCCTTGCACATAGAGAACCAATAAGAAGACCATTGGCTCGAACCGTGTTGGCACCATGGTTATTTGTTATCCTAATTGTAACCAGTAGCTTCACAGCGAGTCTAACATCGATGATGACCGTATCGCAACTTGAACCATCAGTGGTTGATATTCAGACCCTTCAGAAGAGAAATGCTGCAGTTGGTTGTGATGAGAATTCATTTATTGTGAGGTATTTGATTGACATACTAAAATTCAAACCTGAGAACATTAGAAGAATAAATTCCATTAATGGTTACCCTGCAGCATTTAAGAATAATGAGATTGAAGCAGCTTTCTTTGTCGCCCCTCATGCCAAAGTCTTTCTCGCAAAGTACTCATGTGAAGGCTTCGTCCAAGCAGGGAGCACCTTTAGGCTTGGTGGCTTTGGTTTTGTGTTTCAAAGGGGCTCCTCTTTGGCTAGGGATATATCCGAGGCATTGCTAAGTGTTATAGAGAATGGAGAAACAGAGCAACTTGAAAAGGATATGCTGTCCAATTCACATTGCTCTCTTTCAGATAAAAAAGCAAAAGAAAGTTCACCATTAGGTTATCAGCCTTTCCTTGGCCTATTTTGCATTTGTGGCAGTATTGCTATTTTGGCACTATTGTATATCATGCTTTGTTTAACTTTAAAGAATGTTGAGAACTTGGTAAAATACATGAGAGGTGCATTGATTCAGTTATGGAGAATAAGGAGATGGATAACAACACATTGTGTTGGGATCTATTCTAAAGTACAGTCAAGGAGCATGAGAGGGGTTAATGTTGCCATAGAAGCAAGAAATTCAGCGGAAATAGTCATTGATAGTGAGCAAGTCCCTCGTGTAGCTGAAGTTGTTTGA 2385 0.3904 MDLAQKKQLLAIVGTITQSEASLATEINNATKNTPILSLSSFAPITELPSSPFPQLIQLGDDINIQMQCLAAIVGHFKWKKVTTIYEVNSRFSYDPGVLISLSNSLRHVGSEIVNQLAFPSLSLQSRIENELNQLKKKSNRVFLIVHSSLELASVLCKKAKQMGLMEKGYVWIIPNEVASLLDSVNSSVISTMQGVIGFKTHFLETTKPYRKFGFRFRRRFAQEYPEEEENNTPSVFALRAYDAAIAIAKVTNKSQGKFNMKEFLDENLHQSSTFTIINVIGKSYREMAVWSPTHGFSKNFVEHEKMEVNKSNGYGGVVLSNIYWPGDLHSVPRGWTNSNEEMPLKIGVPANDAFAQFVNVTYGDSKHATSITGFSINVFKAAIKNLPYHLHYDFVPFNGSYDEMVNQVNNKTLDAAVGDISILAYRYHLVEFSQPYIDSGLNMVVVEKPNKSKQTWMFMDAFTKEMWLMMAAMHVLVGFVIWLIEREENEELQGLGAMLWFLVTVIFLAHREPIRRPLARTVLAPWLFVILIVTSSFTASLTSMMTVSQLEPSVVDIQTLQKRNAAVGCDENSFIVRYLIDILKFKPENIRRINSINGYPAAFKNNEIEAAFFVAPHAKVFLAKYSCEGFVQAGSTFRLGGFGFVFQRGSSLARDISEALLSVIENGETEQLEKDMLSNSHCSLSDKKAKESSPLGYQPFLGLFCICGSIAILALLYIMLCLTLKNVENLVKYMRGALIQLWRIRRWITTHCVGIYSKVQSRSMRGVNVAIEARNSAEIVIDSEQVPRVAEVV* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2169 794 Pfam Bacterial extracellular solute-binding proteins, family 3 369 675 IPR001638 -
Ahy6g2169 794 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 732 - -
Ahy6g2169 794 CDD GluR_Plant 344 678 - -
Ahy6g2169 794 SMART GluR_14 346 680 IPR001320 GO:0015276|GO:0016020
Ahy6g2169 794 Pfam Ligand-gated ion channel 676 709 IPR001320 GO:0015276|GO:0016020
Ahy6g2169 794 SUPERFAMILY Periplasmic binding protein-like I 2 336 IPR028082 -
Ahy6g2169 794 Gene3D - 440 450 - -
Ahy6g2169 794 Pfam Receptor family ligand binding region 6 256 IPR001828 -
Ahy6g2169 794 Gene3D - 370 439 - -
Ahy6g2169 794 Gene3D - 62 233 - -
Ahy6g2169 794 Gene3D - 457 585 - -
Ahy6g2169 794 SUPERFAMILY Periplasmic binding protein-like II 321 675 - -
Ahy6g2169 794 Gene3D - 236 347 - -
Ahy6g2169 794 PIRSF IGluLR_plant 1 264 IPR017103 -
Ahy6g2169 794 PIRSF IGluLR_plant 251 747 IPR017103 -
Ahy6g2169 794 PANTHER GLUTAMATE RECEPTOR 1 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2169 Ahy-Chr6 103375257 103379783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2169 3 720 Ion Channels AT5G11210 31.194 2.14e-113 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2169 - - ahf:112697235 1550.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2531 16 135089943 135099224 Ahy6g2169 6 103375257 103379783 hybridization