Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2123 ATGACGGGGTTCTCTCTGCCTCTGGTCCTCTCTTCGCTCTCGCCGAGTTGCCGGAGTTCTTCGTCGTCGCTTTTCTCGAGTGTCGCCTTCGTCGAGACTCTTCTCTCTTTCTCTCTGTCTCCCCGGCGTCATCGCCGGCACGCCGCTGTCTTGGTGCTTCCGTTGCGTCAGTTCAGAAGGAAAGGAAGAAACGCAGTGATGGCCATGGAAGTTGACCCTAATCTTGAGTCAACATCCTTCTCCTTCTGGAAACCCCTTCGTCGTAGGTTCAACCCTGACTCTCCTTTCTTCGCTTCTGGCAACCTCCAACGTGAACTGCTAGCCAAACAGGTTGCGTTGGAATTAACGGAAGAGAATGAACAACTTGAGGATTGCATCCAAGATGGAAGGGAAGTCTTTTGCCCAATTGTTGGTTGTGGAACACGCCTGACTTCAATTGAGGATTTTGAAAATCACTATAATGTAAGGCATACTGCATCCTGTTCAGTTTGCTCCAGAGTCTACCCAACTTCTCGTCTGCTCAGCATACACTTATCTGAAGTTCATGATTCTTTCTTCCAGGCGAAACTTGCACGCGGCTATGATGTGTATGAATGCTTAGTGGAAGGCTGTGGTTTGAAATTCAAAACCTACAGTAGCAGGCAGCAGCATCTGGTTGACAAGCACAAATTCCCAACCTCATTCGAATTTTTCAAGAAGTCTCGACCATCAAAGAAACAGAGGTTAAAGTCTCAGCGCAAGCAATCTGTTCAGAAGGAGGATGCATCAGAAACAATGGAAGTCGAAAATGCAGCCATAGATGACCTCACTTCAGCAGTCTCTAGAATGAGCACTTCTGACTCCACTCCTTCCTCTATCAGCTTTGGTCGCCGCAACAAAGGGTTGACCTTTGCTCCTCGAGTTGTTCAGCAAAAAACCCAGCAAAGAGATAATTAG 936 0.4776 MTGFSLPLVLSSLSPSCRSSSSSLFSSVAFVETLLSFSLSPRRHRRHAAVLVLPLRQFRRKGRNAVMAMEVDPNLESTSFSFWKPLRRRFNPDSPFFASGNLQRELLAKQVALELTEENEQLEDCIQDGREVFCPIVGCGTRLTSIEDFENHYNVRHTASCSVCSRVYPTSRLLSIHLSEVHDSFFQAKLARGYDVYECLVEGCGLKFKTYSSRQQHLVDKHKFPTSFEFFKKSRPSKKQRLKSQRKQSVQKEDASETMEVENAAIDDLTSAVSRMSTSDSTPSSISFGRRNKGLTFAPRVVQQKTQQRDN* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2123 311 SMART c2h2final6 132 157 IPR013087 -
Ahy6g2123 311 SMART c2h2final6 197 222 IPR013087 -
Ahy6g2123 311 SMART c2h2final6 159 182 IPR013087 -
Ahy6g2123 311 PANTHER ZINC FINGER PROTEIN 511 76 307 - -
Ahy6g2123 311 PANTHER UNCHARACTERIZED 76 307 IPR039258 -
Ahy6g2123 311 ProSitePatterns Zinc finger C2H2 type domain signature. 161 182 IPR013087 -
Ahy6g2123 311 MobiDBLite consensus disorder prediction 239 311 - -
Ahy6g2123 311 MobiDBLite consensus disorder prediction 270 291 - -
Ahy6g2123 311 ProSitePatterns Zinc finger C2H2 type domain signature. 199 222 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2123 Ahy-Chr6 102356009 102359019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2123 68 305 C2H2 Transcription Factor Family AT5G14140 61.847 2.89e-105 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy6g2123 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2123 - - ahf:112697187 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2470 16 133703283 133706455 Ahy6g2123 6 102356009 102359019 hybridization