Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2088 ATGGCAATGACGAATGGAAACAGCGGCGGTTTCAAAGTAAGCGTGAAGCTAACAAGTGAACCAAGTCTAGTTGCTCCAGCAGAAGAAACAAAGAAAGGAATGTATTTTCTATCTAACCTTGACCAGAACATTGCGGTGATCGTGAGAACCGTATACTGCTTCAAAAGCGCGGAGAGGGGGAACGAGAAGGCGGCGGTTGTGATGAAGAACGCGTTGAAGAAGGTGCTTGTACAGTATTACCCTCTTGCTGGGAGGCTGAGCATAAGTTCAGAGGGGAAGCTTATAGTGGACTGCACTGGTGAGGGTGCACTGTATGTGGAAGCTGAAGCAAACTGTGAAATGGAAGAGATTGGTGATATCACAAAGCCAGACCCTGCCACTCTTGGTATGTTGGTTTATAACATACCTGATGCAAAGCACATACTTCAGATGCCTCCTTTGGTTGCCCAGGTGACTAAGTTCAAGTGTGGAGGATTTTCGGTTGGATTGTGCATGAACCACTGCATGTTTGATGGAATAGGAGCCATGGAGTTTGTGAACTCATGGGGAGAAGTAGCAAGAGAGCTTCCACTCTCAATTCCTCCATTCCTAGACAGAAGCATTCTGAAGGCAAGGGAGCCACCAAAGATAGAGTTTATTCACAAAGAATTCGCTGACATAGAAGACAAGTCAAGCACCAACACCTTGTATGAAGATGACATGGTTTATAGGTCCTTCTGCTTTGACCCTGAGAAGCTCAAGAGCCTCAAGGCTAAGGCAATGGAAGATGGGGTTCTTGATTCTTGCACCACTTTTGAAGTGCTCTCTGCGTTTGTCTGGATTGCAAGAACCAAGGCTCTCAAGATGTTGCCGAACCAAGAGACTAAGCTTCTCTTTGCTGTTGATGGCAGGGCCAAGTTTAATCCTCCTCTTCCCAAAGGATATTTTGGAAATGGAATTGTGCTCACAAATTCTGTCTGCCAAGCAGGTGAACTTACAGAAAAGCCCTTCTCATATGCTGTGAGTCTAATTCAAAATGCAATAAAGATGGTGACAGACAGTTACATGAGATCAGCAATAGATTATTTTGAAGTGACAAGGGCAAGGCCATCACTGGCATGCACCCTTTTGATCACAACATGGTCAAGGTTGTCATTTCACACCACTGATTTTGGTTGGGGTGAGCCTGTTCTCTCAGGCCCAGTTTCATTGCCTGAGAAGGAAGTCATCTTGTTCCTCTCTCATGGCATTGAGAGGAGAAACATCAATGTCCTTCTTGGTTTGCCTGCTCCTGTCATGAAGATCTTCCAAGACTTGATGCAGATTTAA 1308 0.4526 MAMTNGNSGGFKVSVKLTSEPSLVAPAEETKKGMYFLSNLDQNIAVIVRTVYCFKSAERGNEKAAVVMKNALKKVLVQYYPLAGRLSISSEGKLIVDCTGEGALYVEAEANCEMEEIGDITKPDPATLGMLVYNIPDAKHILQMPPLVAQVTKFKCGGFSVGLCMNHCMFDGIGAMEFVNSWGEVARELPLSIPPFLDRSILKAREPPKIEFIHKEFADIEDKSSTNTLYEDDMVYRSFCFDPEKLKSLKAKAMEDGVLDSCTTFEVLSAFVWIARTKALKMLPNQETKLLFAVDGRAKFNPPLPKGYFGNGIVLTNSVCQAGELTEKPFSYAVSLIQNAIKMVTDSYMRSAIDYFEVTRARPSLACTLLITTWSRLSFHTTDFGWGEPVLSGPVSLPEKEVILFLSHGIERRNINVLLGLPAPVMKIFQDLMQI* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2088 435 Gene3D - 217 434 IPR023213 -
Ahy6g2088 435 Pfam Transferase family 21 432 - -
Ahy6g2088 435 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 15 434 - -
Ahy6g2088 435 Gene3D - 15 216 IPR023213 -
Ahy6g2088 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2088 Ahy-Chr6 101397595 101401032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2088 22 433 Monolignol Biosynthesis Gene Families AT5G48930 35.597 3.33e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2088 K15400 - gmx:100792433 776.933