Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2039 ATGTTGTTCAGGTCGCCGCTGCCGCTTGAGGTGGCTGCCGTGGCTGCCGCCAAACCGGTTCGGAGACTGTCGCTGTTTCAGTTCAGCCATTCTTCCTCTGTCTTGAGTACTGGCAGCTGTTTCCTTAGCCGTTCATTGTCTTCAGTCACACTCCACACGTCAAGCCGCATACACACTATTCATTCTTTCCTTCTTCCTTTCTGCCCCCATTCTTATATAAGCGTTGATGTTTCTCTCATACACCAAACAGAAAACATTAAAACACCACTCTCACAATCGATGGAGAGCGACACGCTTCTTCCTCACACCACCGTTTCTTGGACCGAACACAGCAATGACATTGGAATTTCCATGAATGCCCCTCTCACTTCCTTCAAATCCATACTCCAACCTCCTCCAATTACCATAAACCCCTTCCCGTTCCCACAACAACATACCGTACCCACTCTCACTACTACTGCTGATCATGACAACTTTCTGACACACCAAAACATGGACTCCTTCGCTCCAGAACACTCTTTCTTTACTCCCAAAGCCTCTTTCTTCAACAACAATCCTTTTGATAATGCCTTCGATTTGGGACCTGACACCGCTTTCTTCTTCTCCGGGAACCATTCTTCTCAAACTGGCTCGCCTGACATGAGTTCCGGTACCGAATTCCCGCCGGCGACTCGGCTGCTCCCGGCGGGGGCTACCGACGATGATCCCATGGCGCTGGGTGCTGGATTTGGTGCCTCCGCTGCGTTTGAAATGGAAGCAGTTGGTGGCTCTGGAAACGCTCTGTTTTCGAGCAGGGGAAAGGGATTGGAAGCTTTGGAAGTGAGTAATTTGAAGAGGGTGCAGGAAGTTGAAGAAGCTAGCAATGAGGGTTCAATGTGGAATTCTGAAGAGGATGATGAGAGAACTGATGAGGTGGTGGTCGAGGAGAGTGGGAAGAAGAAGAAGAAGGGGATGCCGTCCAAAAATCTTATGGCGGAGAGGCGGCGAAGGAAGAAGCTCAATGATAGGTTGTACATGCTTAGGTCTGTTGTGCCAAATATTAGCAAGATGGACAGAGTTTCGATACTTGGAGATGCAATTGACTACATGAAGGAGTTACAGCAGCGGGTCAATGATCTTCAAAATGAACTGGAGTCAACTCCAACTAGCTGTTCGCCATCATCTTCCACCAGCATTCAACCTTTGACACCCACACTGCAAACCCTTCCATGCCGGGTGAAGGAAGAACTGTGTCCGATGCCAATCCCAGGAAACCAAACAGCAAAGGTGGAAGTTAAGGTAAGGGACGGCAAAGCTGTCAACATTCACATGTTTTGTAGCCGCCGACCAGGTCTTCTGGTCTCTACAATGCAGGCTCTGGATAACTTCGGATTAGATGTTCAGCAAGCTGTTATTAGCTGCTTCAATGGTTTTGCTTTAGACATCTTCAAAGCTGAGCAATGCAGAGAAGGGCAGGATGTGCTTCCTGAGGAAATCAAAGCAGTTCTGCTGGATTTAGCAGGATCCAAATAA 1512 0.4854 MLFRSPLPLEVAAVAAAKPVRRLSLFQFSHSSSVLSTGSCFLSRSLSSVTLHTSSRIHTIHSFLLPFCPHSYISVDVSLIHQTENIKTPLSQSMESDTLLPHTTVSWTEHSNDIGISMNAPLTSFKSILQPPPITINPFPFPQQHTVPTLTTTADHDNFLTHQNMDSFAPEHSFFTPKASFFNNNPFDNAFDLGPDTAFFFSGNHSSQTGSPDMSSGTEFPPATRLLPAGATDDDPMALGAGFGASAAFEMEAVGGSGNALFSSRGKGLEALEVSNLKRVQEVEEASNEGSMWNSEEDDERTDEVVVEESGKKKKKGMPSKNLMAERRRRKKLNDRLYMLRSVVPNISKMDRVSILGDAIDYMKELQQRVNDLQNELESTPTSCSPSSSTSIQPLTPTLQTLPCRVKEELCPMPIPGNQTAKVEVKVRDGKAVNIHMFCSRRPGLLVSTMQALDNFGLDVQQAVISCFNGFALDIFKAEQCREGQDVLPEEIKAVLLDLAGSK* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2039 503 PANTHER BHLH TRANSCRIPTIONAL FACTOR 284 501 - -
Ahy6g2039 503 Coils Coil 356 383 - -
Ahy6g2039 503 CDD bHLH_AtAMS_like 320 378 - -
Ahy6g2039 503 Gene3D - 307 381 IPR036638 GO:0046983
Ahy6g2039 503 CDD ACT_UUR-ACR-like 435 476 - -
Ahy6g2039 503 MobiDBLite consensus disorder prediction 305 322 - -
Ahy6g2039 503 ProSiteProfiles ACT domain profile. 434 503 IPR002912 -
Ahy6g2039 503 Pfam Helix-loop-helix DNA-binding domain 324 367 IPR011598 GO:0046983
Ahy6g2039 503 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 320 386 IPR036638 GO:0046983
Ahy6g2039 503 MobiDBLite consensus disorder prediction 284 322 - -
Ahy6g2039 503 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 317 366 IPR011598 GO:0046983
Ahy6g2039 503 SMART finulus 323 372 IPR011598 GO:0046983
Ahy6g2039 503 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 284 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2039 Ahy-Chr6 99270884 99279629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2039 185 479 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 51.163 2.03e-96 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy6g2039 HLH 5.60E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2039 - - ahf:112697118 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2377 16 130208221 130212111 Ahy6g2039 6 99270884 99279629 hybridization