Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2033 ATGCGGCACCCAGCCCCACCCAGGGAAGCGAGAAAGCGCCAACAAATAATAACAAAAAATGCTTTGTTCATTCTGAGCGTTGGTAAAATTAGAATAGAAGCCTTTCCCAACGACGAAAATCACGACCCTTCTCCAAAACAAACCGCCCCTCCCCCTCTCTCCCTTTTTTTCATGTCCATCTTGCCCTCACAAGCCCAGCCAGCACCATCGTCTTCTTCATCTCCTTCAACTTCAAACCCTAATTCCCAATATGGATTCCCGAATTCTCTTCCCTCTTCCTCAATTTCCTCTCTCTCTTCGCAATTCAACAACTTCGACAGCAACATCGATGCTTCTTTCGGATCCCTTCGAATCTCTGATCCCCAATCTCCCTGCCACCATCCAGGTTCATCAACTCAAGCTACAGAAGATTCTCGTGGACCTTCCGAAAAGGTGATGGAGTCGGTGTCTGCAAGTGGTATAAGTTCTTCTTCACCTTCACAAAACTCTGGAATACATTCTAGGAGTCACGCTGGAAAACGAGCAGGTGGATCATCCCACTCATCAGGGAAGACAGCAGGAATGCTTTCCTCTCATAGACATCAACAGAATCCTGTGTCTGCAAATTATCCTGGAAGTTCCCCTCCACTGGGAAGGAGATCTCAGATGGTGAATGGCAATTACTTGCTGAATTTTCAGTATGATCCAATATCCCGTTCTCAACCAAGAGGGCCTCCACCTCCTCTTCCAAGAAGGCAACGGAAGAGAAGGCCATACAACAAGGATTTGTTTCTGCAGGCAAATTACAGATTCATGGTCCTAGATACAGGAAATTATTCTCCCCAGTCGATGGATCCAGATAAAATGTTGCAGTGGGAGGATATTATATGTGTGACATATTCAACCCCCTTCCCAGTTCAGTGCCCAATTTGTTTGGAGTATCCTCTGTGTCCCCAGATAACCTCATGCGGGCATATTTTTTGTTTCCCATGTATACTACAGTACTTGATGCTGGGTGAAGAGGATCACAAAGGTGATTGCTGGAAAAGGTGTCCTTTATGCTTTGTGATGATATCTGTCAAGGATTTGTATACTGTCCACATAACAAATGTCAAACAATATCAAGTAGGGGATAATATTGAGTTCACATTTTTAACACGAAAAAAGGATTCATTTACTTTATCTCATAAAAATAAACAAGAGACAGATATTGCATCAAGTAGCAATGGAGATTTATGTGATCCGTTTTCCAAGTTCACACTCACATCAGATGTAGATCTCTCTGTTAGACACGCAATATCAGATCTAGATGGCTGGCTGGCCAGAGCTGATTCAGGGCTTGTCGATGACCTGGAGAAGCTTCCATATGTTTGTGCTGCAATGCAACAACTAAAACAAAGGAAGAAATATTGGAATGAACATAGGGCTTCTGACATTTCTTCAAGGCTTATTGATTCTGAACATCAGATACAATTGACAGCTGCAAATGCTGTGGATGCTGATGGTGAAACCCATTCTAATGGATCAAGGATTTCCACTGTAGATTTCCAGGACCAAAGTAAGGGAATAATATTGGATAAGTCAACTGCTGAAGCCTGTCCACATCAAACTTTGGATGGAGAGAAATTGATAGAACAAGAAATCAATCCATCCTCATCATATGAGGAGAAGAATGGTGTTCAAAGGCATTCAAATGGAATTGGAGAGACGAAGGAAAGTGATTCTTACAATTTCTTTCAGGCTGTGGATGGCCAGCATATAATTCTCCATCCACTGAACACGAAATGTTTACTTCATCATTATGGGAGTTATGACATGCTTCCACACAGAATAACGGGAAAGATTCTGCAAATGGAAACGGTTACCCAGTCCGAGGCCATGAGGAGGCGATATAAATTCTTAAGTCATTTTCCGTTGACAACAACTTTTCAGCTGTGTGAAATTGATTTGAGTGAGATGTTGCCTCCTGAAGCACTGGCCCCATTTATGGATGAAATAAAGAAGCGTGCACACCAGAGGAAACAACTCGCAAAGAAGGAGCAAAAGGAAAAATTCAAGGCGGAAGCTGCTGCCGCTTATTCTTTTCCCATTCCAAGTTATAAACTTGCTTCGTATGATGACACTCCAACATTTTCTATGGATGACTTTGAAGCCTTGGGAAATTCAGCTATGTCATCAAGTCCTCCAGTTGTTGGGGAAAGAAAAACATTCTCAAATGTTACCCGGCTTGGATTCGCCGCTGCTCATGATTCTCCATCCTTACAAATCCAAGAAACCAGCAGTACCCATAATAACAATACGGTCACTAGTCCTACTGGCACAACAGGTCCAAGAAATGTGGAGACACCATCATATTCCAATGTTACATCCAGAGCCGAATCAAATGTAAACATGAATGCATCAAACACAAATGACTTTGGGAAGAAGCGGAAAAAGCAAAATCGAGTTCTCCTATCGACATCTGGTGGCAGGCGTTACTGA 2460 0.4272 MRHPAPPREARKRQQIITKNALFILSVGKIRIEAFPNDENHDPSPKQTAPPPLSLFFMSILPSQAQPAPSSSSSPSTSNPNSQYGFPNSLPSSSISSLSSQFNNFDSNIDASFGSLRISDPQSPCHHPGSSTQATEDSRGPSEKVMESVSASGISSSSPSQNSGIHSRSHAGKRAGGSSHSSGKTAGMLSSHRHQQNPVSANYPGSSPPLGRRSQMVNGNYLLNFQYDPISRSQPRGPPPPLPRRQRKRRPYNKDLFLQANYRFMVLDTGNYSPQSMDPDKMLQWEDIICVTYSTPFPVQCPICLEYPLCPQITSCGHIFCFPCILQYLMLGEEDHKGDCWKRCPLCFVMISVKDLYTVHITNVKQYQVGDNIEFTFLTRKKDSFTLSHKNKQETDIASSSNGDLCDPFSKFTLTSDVDLSVRHAISDLDGWLARADSGLVDDLEKLPYVCAAMQQLKQRKKYWNEHRASDISSRLIDSEHQIQLTAANAVDADGETHSNGSRISTVDFQDQSKGIILDKSTAEACPHQTLDGEKLIEQEINPSSSYEEKNGVQRHSNGIGETKESDSYNFFQAVDGQHIILHPLNTKCLLHHYGSYDMLPHRITGKILQMETVTQSEAMRRRYKFLSHFPLTTTFQLCEIDLSEMLPPEALAPFMDEIKKRAHQRKQLAKKEQKEKFKAEAAAAYSFPIPSYKLASYDDTPTFSMDDFEALGNSAMSSSPPVVGERKTFSNVTRLGFAAAHDSPSLQIQETSSTHNNNTVTSPTGTTGPRNVETPSYSNVTSRAESNVNMNASNTNDFGKKRKKQNRVLLSTSGGRRY* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2033 819 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 294 398 IPR013083 -
Ahy6g2033 819 MobiDBLite consensus disorder prediction 543 562 - -
Ahy6g2033 819 MobiDBLite consensus disorder prediction 742 819 - -
Ahy6g2033 819 MobiDBLite consensus disorder prediction 64 98 - -
Ahy6g2033 819 Coils Coil 656 676 - -
Ahy6g2033 819 MobiDBLite consensus disorder prediction 228 250 - -
Ahy6g2033 819 ProSiteProfiles Zinc finger RING-type profile. 301 347 IPR001841 -
Ahy6g2033 819 SMART ring_2 301 347 IPR001841 -
Ahy6g2033 819 Pfam Zinc finger, C3HC4 type (RING finger) 301 347 IPR018957 GO:0046872
Ahy6g2033 819 PANTHER RING FINGER 10 FAMILY MEMBER 156 816 IPR039739 -
Ahy6g2033 819 MobiDBLite consensus disorder prediction 745 797 - -
Ahy6g2033 819 MobiDBLite consensus disorder prediction 113 215 - -
Ahy6g2033 819 MobiDBLite consensus disorder prediction 148 215 - -
Ahy6g2033 819 MobiDBLite consensus disorder prediction 113 139 - -
Ahy6g2033 819 SUPERFAMILY RING/U-box 300 354 - -
Ahy6g2033 819 ProSitePatterns Zinc finger RING-type signature. 316 325 IPR017907 -
Ahy6g2033 819 CDD RING-HC_RNF10 301 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2033 Ahy-Chr6 99196291 99204340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2033 209 769 C3H Transcription Factor Family AT3G26730 58.333 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2033 - - adu:107494651 1544.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2370 16 130086288 130094531 Ahy6g2033 6 99196291 99204340 hybridization