Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1970 ATGGGAAACTCTTGCCAAGAAACTCCACCACTACTTCTCCAAGACCTAAAAGTAACAATCCACCAAGCTTCAATGATTTTTCCCTCCAAAGAAACACATAACAATAAGAATAACAACAACAATAACAATAACAAGTCTTTGTTCTTATCAAACATAGACAAAGTCCTAAACTTCGACGTGGAAACGGTTCATTTTTTCGCGGCGAACAAGGATTATCCGTCGTCCAAGGTTGCACAGAAGCTCAAGGACGCCCTGGAGGACGCCCTTGTAGCTTACGAGTTCTTGGGAGGGAGAATGAAGATGAACTCCGAGACCGGAAGGTTAGAGATAATTTGCAATGGGGAAGGTGCTGGGTTTGTTGTGGCTTCTTGTGATTATAGATTGGATGAGATTGGAGACTTGGCTTTTCCAAACCCAGCATTTGCACAATTTGTTCATAAGTCTAAGGATTTCCTCAAACATGGTGATTCTCCACTATGTGTTGCCCAGATAACATCATGCAAGTGTGGGGGATTCGTAATTGGCTTCACCACAAGCCACACAACCTTTGATGGTCTCAGCTTCAAAACTTTCTTAGACAACCTTGCCGCGTTGGCTTCCAACAAACGAATGCCTGTGATCCCCTCCCACGACAGGCACCTCCTGGCCGCACGATCTCCACCACGTGTCACCTTTCCACATCCCGAGATGCTTGACCTTGGAGAATTCCCCACAAGCGCCGAAGCTGGCGTCTTCGAAGCCTCCTCCGAGGAACTCCACTTCAAAGTCTTCCATTTAACCACTGATAACATCAACCGCCTCAAGGAGAAAGCCAAGGATAGTAATGTAAATTCCCGTGTCACCGGCTTTAACGTTGTTACCGCGCTTGTCTGGAGGTGCAAAGCTCTATCCTTTTCGCCGCCGGATCCTAATAGGTCGTCCACCATACTCTATGCCGTTGATATTCGGTCAAGGCTGAGCCCTCCATTGCCAAAATCCTACGCGGGTAACGCGGTTCTAACCGCTTACGCAACGGCAAAATGCGAGGTACTAGAGAAGGGGTCGTTTGCGAAGTTGGTGGAGATGGTAAGTGAGGGTGCAAAGAGAATGAATGATGAGTATGCGAGGTCTATTATAGATTGGGGAGAGTTGCACAATGGATTTCCAAGTGGAGAAGTTTTGGTGTCTTCATGGTGGAGATTAGGGTTTGAAGAGGTGGAGTATCCTTGGGGTAAGCCAAGGTATTGTTGTCCCGTGGTTTACCATAGAAAGGACATTATACTATTATTTCCTCCTGTTGCTGGCAGCGATGGCACTGATAATGGGATTAATATTATAGTGGCACTTCCTCCTAAGGAAATGGAGAAATTCAAGAATTTCTTCTATGAATTCTTGATATGA 1380 0.4594 MGNSCQETPPLLLQDLKVTIHQASMIFPSKETHNNKNNNNNNNNKSLFLSNIDKVLNFDVETVHFFAANKDYPSSKVAQKLKDALEDALVAYEFLGGRMKMNSETGRLEIICNGEGAGFVVASCDYRLDEIGDLAFPNPAFAQFVHKSKDFLKHGDSPLCVAQITSCKCGGFVIGFTTSHTTFDGLSFKTFLDNLAALASNKRMPVIPSHDRHLLAARSPPRVTFPHPEMLDLGEFPTSAEAGVFEASSEELHFKVFHLTTDNINRLKEKAKDSNVNSRVTGFNVVTALVWRCKALSFSPPDPNRSSTILYAVDIRSRLSPPLPKSYAGNAVLTAYATAKCEVLEKGSFAKLVEMVSEGAKRMNDEYARSIIDWGELHNGFPSGEVLVSSWWRLGFEEVEYPWGKPRYCCPVVYHRKDIILLFPPVAGSDGTDNGINIIVALPPKEMEKFKNFFYEFLI* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1970 459 Gene3D - 12 231 IPR023213 -
Ahy6g1970 459 Gene3D - 238 456 IPR023213 -
Ahy6g1970 459 Pfam Transferase family 16 455 - -
Ahy6g1970 459 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 15 457 - -
Ahy6g1970 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1970 Ahy-Chr6 96935895 96941317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1970 16 457 Monolignol Biosynthesis Gene Families AT5G48930 28.913 4.75e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1970 K13065 K15400 gmx:100805510 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2295 16 127344487 127351457 Ahy6g1970 6 96935895 96941317 hybridization