Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1960 ATGGATCTCAAAAGCTTCTTCATATTTTTATTTTTATTGATGCCATCATTCTGTTCCTCTCAATCCCTGAGGATTAACAACATTTTCTTTACTCATCGTAAGATACTACCCAAACAGCAATCCAATGATAATAATAATAATAATGTTACTTCTTATGCTGTCATATTTGATGCTGGTAGCTCTGGATCTCGTGTTCATGTCTTCCATTTTGACCAGAATCTCAACCTCCTTCATATTGGCAACGAAATTGAGTTTTATAAGAAGATCGAACCCGGTTTGAGTGCATATGCAGATAATCCAGAAGAAGCAGCAGAATCTCTGATTCCACTCTTAGACGAAGCACAAGATATTATTCCACCGCAACTCCAACCCAAAACACCCCTTAGACTTGGGGTTAGGGATATGTTCAGGACAAGAAGTAACCTGAACGTTCAATCTGATGCAGTAACTGTTATTGATGGAACCCAAGAAGGTTCTTATATGTGGGTGGCACTAAACTATCTATTGGGAAACTTGGGAAACAAGTATTCAAGGACGGTGGGAGTGGTTGATCTTGGAGGTGCATCAGTTCAAATGGCATATGCTGTTTCAAAGGACACAGCTCAAAATGCACCATTACCACCAGATGGACAGGATCCATACATTAAAAATGTCATTCTTAAAGGAACCGAATATAACCTCTATGTTCATAGTTACTTGCGCTATGGTAGTGACGCGGCTCGTGCTGAAATTTTGAACATCACACATAATTCTGCTAACCCTTGCGTTTTAGCTGACTTTGATGGGACATATGCATACTCAGGAAATGAGTATAGGGCATATGCACCAACTTCAGGGTCCAGCTTTGAAAAATGCAGGCATATAGTGCGTAAGGTCCTGAAATTGGAAGCACCATGTCCATATAATAAAGAGTGCACTTTTGGTGGAATATGGAGTGGTGGAGGTGGCAATGGACAAAAAAATCTCTATGTTGCTACGTCTTTCTTTTATATAGCATCACAGACGGGTATAGTTGATCCAAACAAACCCAATTCGAAGGTTATTCCGGAGGATTACAAGGTTGCAGCTAAGAGAGCATGTAATACGAAATATGAGGATGCTGCATCCATTTATCCTCTTATTACCATTGACAGACTTCCTTATGTCTGCATGGATCTCACATACCAATATACATTGCTCGTTGAGGGATTCGGCATAGATCCATGGCAAGAGATTACAGTTACTCAGCAAATTGAATATGAAGATGCTTCCGTAGATGCAAGCTGGCCTCTAGGGAGTGCCATAGAAGCCATATCTTCATTACCTAAATTTGAGCGATTGATGTATTTTATTTAA 1335 0.3985 MDLKSFFIFLFLLMPSFCSSQSLRINNIFFTHRKILPKQQSNDNNNNNVTSYAVIFDAGSSGSRVHVFHFDQNLNLLHIGNEIEFYKKIEPGLSAYADNPEEAAESLIPLLDEAQDIIPPQLQPKTPLRLGVRDMFRTRSNLNVQSDAVTVIDGTQEGSYMWVALNYLLGNLGNKYSRTVGVVDLGGASVQMAYAVSKDTAQNAPLPPDGQDPYIKNVILKGTEYNLYVHSYLRYGSDAARAEILNITHNSANPCVLADFDGTYAYSGNEYRAYAPTSGSSFEKCRHIVRKVLKLEAPCPYNKECTFGGIWSGGGGNGQKNLYVATSFFYIASQTGIVDPNKPNSKVIPEDYKVAAKRACNTKYEDAASIYPLITIDRLPYVCMDLTYQYTLLVEGFGIDPWQEITVTQQIEYEDASVDASWPLGSAIEAISSLPKFERLMYFI* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1960 444 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 152 167 IPR000407 GO:0016787
Ahy6g1960 444 Gene3D Exopolyphosphatase. Domain 2 153 412 - -
Ahy6g1960 444 Pfam GDA1/CD39 (nucleoside phosphatase) family 47 436 IPR000407 GO:0016787
Ahy6g1960 444 Gene3D - 38 141 - -
Ahy6g1960 444 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 7 444 - -
Ahy6g1960 444 CDD NBD_sugar-kinase_HSP70_actin 54 194 - -
Ahy6g1960 444 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 7 444 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1960 Ahy-Chr6 95459419 95468056 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1960 38 433 Calmodulin-binding Proteins AT3G04080 50.120 7.49e-144 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1960 K14641 - gmx:100781628 567.385