Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1954 ATGGGATCACCCGAATCAAATTTGCCACCAGGTTTTAGGTTCCATCCAACGGATGAAGAACTCATTCTTCACTACCTTAGGAAGAAGGTAGCATCCATACCCTTACCTGTTTCCATCATCGCTGAGGTTGATATCTACAAATTGGATCCATGGGAATTACCAGCTAAGGCTGCGTTTGGTGAGAAAGAATGGTACTTCTTCAGTCCAAGAGACCGGAAGTACCCAAACGGTGCGAGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAGGCTACGGGTACCGACAAGACCATCGTGGTGTCGCCGGCGGCCACAGTTACACGTAGAGTAGGCCAAGAGAGCAGCGTTGGTGTCAAGAAAGCTCTTGTTTTCTACAAAGGAAGGCCTCCAAAGGGTGTCAAAACCAATTGGATCATGCACGAATATCGTCTTGTAGACAACAATAGACCCATTAAGCTCAAAGATACCTCCATGAGATTGGATGACTGGGTTCTATGCCGGATTTATAAGAAGTCGAAATTCTCAGTATCTTCACCGGAGGAATCACCGTCGATTGAAGTTCAGGCTGCAGAAGAAAATGGTTTATTCAAGAACACCATTTTAAGGAGTCCAATTCCAACACCGTCGCCATCACCACCGCCGCCGCTGCCGCAGTCACTGCTCTCTCAAAAATCTGTGTCCTTCTCAAACCTCTTAGATGCCATGGACTACTCCATGCTCAGCACCATCTTATCTGAGAACAATAACAACAGCACCCTTGATCAGCAACAATACTCGCAGATCAACACCAACCAATTGAACCATTCATCGAACATGGAGAACACTAGTAACAGCAACATGATGGTGATGAGGTCAAAGCGCCAGATAGAGGAGGAAACAACAACGGTGTTGCACCCATCAAAGAAGTTCCATCACCAACTTATGGGCTCTTCTTCTTGCAGCTTCCCTAATAACATTAACAACACAAACACTGCACAATACGAGAACCCGCAATGGAACTACCTTGTCAAGCAATCCTTCTTGAACCAGCACTTACTTCTCGCTCCTCATCTTCGATTTCAAGGATAG 1068 0.4635 MGSPESNLPPGFRFHPTDEELILHYLRKKVASIPLPVSIIAEVDIYKLDPWELPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVVSPAATVTRRVGQESSVGVKKALVFYKGRPPKGVKTNWIMHEYRLVDNNRPIKLKDTSMRLDDWVLCRIYKKSKFSVSSPEESPSIEVQAAEENGLFKNTILRSPIPTPSPSPPPPLPQSLLSQKSVSFSNLLDAMDYSMLSTILSENNNNSTLDQQQYSQINTNQLNHSSNMENTSNSNMMVMRSKRQIEEETTTVLHPSKKFHHQLMGSSSCSFPNNINNTNTAQYENPQWNYLVKQSFLNQHLLLAPHLRFQG* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1954 355 Pfam No apical meristem (NAM) protein 9 144 IPR003441 GO:0003677|GO:0006355
Ahy6g1954 355 MobiDBLite consensus disorder prediction 200 221 - -
Ahy6g1954 355 ProSiteProfiles NAC domain profile. 8 171 IPR003441 GO:0003677|GO:0006355
Ahy6g1954 355 SUPERFAMILY NAC domain 5 171 IPR036093 GO:0003677|GO:0006355
Ahy6g1954 355 MobiDBLite consensus disorder prediction 205 219 - -
Ahy6g1954 355 Gene3D NAC domain 17 175 IPR036093 GO:0003677|GO:0006355
Ahy6g1954 355 PANTHER NAC TRANSCRIPTION FACTOR 56 6 283 - -
Ahy6g1954 355 PANTHER OS01G0104200 PROTEIN 6 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1954 Ahy-Chr6 95239640 95241761 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1954 4 355 NAC Transcription Factor Family AT3G04070 47.956 3.36e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy6g1954 NAM 8.90E-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1954 - - ahf:112754912 648.277