Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1952 ATGGAAGAGCCTGTCGTAGTTAACAAAGGCGAGGAGCCGCTGGATTTGCCACCAGGTTTCAGATTCCACCCAACAGACGAAGAAATCATCACTTATTACCTCACCGAGAAGGTCATGAACAGCAGCTTCAGTGCAACTGCCATAGGTGAAGCCGATTTGAACAAATCCGAACCCTGGGATTTACCAAAGAAAGCAAAGATGGGAGAGAAGGAGTGGTACTTCTTTTGTCAGAAGGACAGGAAATACCCGACGGGGATGAGGACCAATAGAGCAACGGATTCCGGTTACTGGAAGGCAACCGGAAAAGACAAAGAGATTTTCAAAGGGAAAGGGAATCTCGTTGGGATGAAGAAAACGCTTGTTTTCTACCGAGGTAGAGCTCCCAAGGGTGAAAAGACCAATTGGGTCATGCATGAGTTCAGATTGGAAGGCAAATTTGCCAATTATAACCTCCCCAAGGCTGCAAAGGATGAATGGGTTGTGTCGAGGGTTTTTCACAAGAACACAGATGTAAAGAAGACTACTACCCCATCATCATCATCATCAATAATTCCTGGCCTTTTGAGGATCAACTCAATAGGCGATGATCTTCTAGATTGTTCCACACTCCCTCCTCTCATGGACCCTCACCCTACTCCTCTCGATACAACAAAATCCGACGGCTATTATTTCCCCTCCTTCTCATCATCACATCAGATTCTCAATATCAAGCCCGAAGAACACAACACAAGCCACCAAATTCCCATCACCAACTACCAGATTCCAAATTTCAATACCACACTCTCTTCTTCATCATCTCATCAAATCAGACTCCAAAATCATCTCAACTTGTTCTCATCATCATCATCAAATAACAATTACCATAATAGCTCGTGGCCAAGCTATTATGATGAGGTCCACCACCATCATCAAGATGATATTCTACTAAGAGCAATCGCCTCAAAGAACTATAGCAACGGAGGAGGAGGAGGCGGCGGCGAGTGCAAGGTGGAGCAATTCTCCTCCGGCAACCAGTCAGTGGTGAGCGTTTCGCAAGACACGGGGCTGAGCAACGACAGAACCACCAATGACACGTCATCGGTGGTTTCGAAGCAGCAGCATAATAATAAAACATTGTACGAGGATCTTGAAGGTCCTTCTTCATCAGTTGCACCTCTTTCAGATTTGGAATGCTTGTGGGATACCTACTGA 1191 0.4559 MEEPVVVNKGEEPLDLPPGFRFHPTDEEIITYYLTEKVMNSSFSATAIGEADLNKSEPWDLPKKAKMGEKEWYFFCQKDRKYPTGMRTNRATDSGYWKATGKDKEIFKGKGNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFANYNLPKAAKDEWVVSRVFHKNTDVKKTTTPSSSSSIIPGLLRINSIGDDLLDCSTLPPLMDPHPTPLDTTKSDGYYFPSFSSSHQILNIKPEEHNTSHQIPITNYQIPNFNTTLSSSSSHQIRLQNHLNLFSSSSSNNNYHNSSWPSYYDEVHHHHQDDILLRAIASKNYSNGGGGGGGECKVEQFSSGNQSVVSVSQDTGLSNDRTTNDTSSVVSKQQHNNKTLYEDLEGPSSSVAPLSDLECLWDTY* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1952 396 ProSiteProfiles NAC domain profile. 16 167 IPR003441 GO:0003677|GO:0006355
Ahy6g1952 396 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100-LIKE 3 382 - -
Ahy6g1952 396 MobiDBLite consensus disorder prediction 339 376 - -
Ahy6g1952 396 MobiDBLite consensus disorder prediction 339 381 - -
Ahy6g1952 396 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Ahy6g1952 396 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Ahy6g1952 396 SUPERFAMILY NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Ahy6g1952 396 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1952 Ahy-Chr6 95122061 95124041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1952 2 396 NAC Transcription Factor Family AT3G04060 49.502 3.49e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy6g1952 NAM 1.80E-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1952 - - aprc:113861501 499.59