Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1910 ATGAGCAAGAGTACTGCTACTACCACACCGTGCTGCAGCAAAGTTGGGATCAAGAAAGGACCATGGAGCGCCGAGGAAGACGAGATCCTCTCCAAATTTGTCCAGAAGGAAGGGGAGGGGCGGTGGCGTACGCTCCCCAAGAGGGCCGGGCTGCAGCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATGAACTACCTCCGTCCCTCCGTCAAGCGAGGCCAGATCGCTCCTGACGAGGAGGATCTCATCCTCCGCCTTCACCGTCTCTTGGGCAACAGGTGGGCTTTGATAGCTGGCAGATTACCTGGCAGGACTGATAACGAGATCAAGAATTACTGGAATACCCATCTAAGCAAGAAGCTCATAAAGCGAGGCATAGATCCAAGAACCCATAAGCCATTAATCACCACCAATTATTCTACTACTCCTGTTACTACTTCAAATGGAGGTGTTTTTCATCATCATCATCAACATTCAAATGTAATAACCTCTTCAATCATAATGCCGCTGCAGCACCAACCTACGATGACTGTGAATCCTGCGTCAGAAATTGGTAATGTCAACAACAGCAAATTTGATTATGCTCCAATAATTAGTGCTGGTGGGAACATTATGGAAGAGAATAATAATAATAATAATAATGTTGTTGTTGATTATCATCATCATGGCGGAAATAATGGGAATAATAATAATGATGTTGAGGAGGAAGATACATTGTTGGTTTTTCTGAATTCTTTATTTGATGGTGGTAACAATGAAGTGATGAATAATAACAATAATAATAATAATAATGATAATAGTGGAACAGACGAACTAGCGGTGTTTCAGCATCATCATGATGATGAGGGTGATGTTACAATGTTCCCTCCACCGCTTTCAACATCTTTTCGTCTTGAAGATTGGGAAGCAGAATTTAGCAATGCACTTATAAATCAACAAGATGGTTCATCATCATCATCACCTCCTAATAAGTAA 975 0.4318 MSKSTATTTPCCSKVGIKKGPWSAEEDEILSKFVQKEGEGRWRTLPKRAGLQRCGKSCRLRWMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWALIAGRLPGRTDNEIKNYWNTHLSKKLIKRGIDPRTHKPLITTNYSTTPVTTSNGGVFHHHHQHSNVITSSIIMPLQHQPTMTVNPASEIGNVNNSKFDYAPIISAGGNIMEENNNNNNNVVVDYHHHGGNNGNNNNDVEEEDTLLVFLNSLFDGGNNEVMNNNNNNNNNDNSGTDELAVFQHHHDDEGDVTMFPPPLSTSFRLEDWEAEFSNALINQQDGSSSSSPPNK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1910 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Ahy6g1910 324 SUPERFAMILY Homeodomain-like 16 113 IPR009057 -
Ahy6g1910 324 SMART sant 71 119 IPR001005 -
Ahy6g1910 324 SMART sant 18 68 IPR001005 -
Ahy6g1910 324 Gene3D - 76 140 - -
Ahy6g1910 324 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Ahy6g1910 324 Pfam Myb-like DNA-binding domain 76 117 IPR001005 -
Ahy6g1910 324 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 266 - -
Ahy6g1910 324 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Ahy6g1910 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Ahy6g1910 324 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Ahy6g1910 324 Gene3D - 18 71 - -
Ahy6g1910 324 PANTHER TRANSCRIPTION REPRESSOR MYB5-LIKE 6 266 - -
Ahy6g1910 324 CDD SANT 77 117 IPR001005 -
Ahy6g1910 324 CDD SANT 21 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1910 Ahy-Chr6 93590661 93592056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1910 5 149 MYB Transcription Factor Family AT3G13540 74.483 1.44e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy6g1910 Myb_DNA-binding 7.30E-14 CL0123