Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1909 ATGGATGTTGACTCGGAACCACTCAATTCACAAGACAATGTCGAAGATTGCATGATGACTGGTGTGAAAGAAAATGTTAACTGCACTTGTGATTGCGGTGGCACCAGTAGTAAGTGTGCGTCTGTAACAGCCGATGATATTATAAACCAGACCTTTGAAACATCGGATGCAGCTTATAAGTTGTATGTACGTTATGTGAGGTGTCTCGGGTTTGGAGTTCACAAGGGTGATACAACACGTGGAAAAGATGGAACACAGTGTAGAAGGATGTTTTTTTGTAGCAAGGAAGGAAAGAGAGCCGAAAAATACATATCTAGTTTGAGTAGGAAGAGGGAGCATAGAGCGCTGACTCGCACTGGTTGTGAAGTCATGCTTGCTGTGTATCTTGACACTAAAACTTCAACTTGGAGGGTTAAAAAATTAGTTGAGAAGCACAACCATGATCTTGGCCCATAA 456 0.4211 MDVDSEPLNSQDNVEDCMMTGVKENVNCTCDCGGTSSKCASVTADDIINQTFETSDAAYKLYVRYVRCLGFGVHKGDTTRGKDGTQCRRMFFCSKEGKRAEKYISSLSRKREHRALTRTGCEVMLAVYLDTKTSTWRVKKLVEKHNHDLGP* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1909 151 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 4 149 - -
Ahy6g1909 151 Pfam FAR1 DNA-binding domain 61 149 IPR004330 -
Ahy6g1909 151 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 4 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1909 Ahy-Chr6 93556881 93557336 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy6g1909 FAR1 4.30E-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1909 - - adu:107493692 283.493