Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1899 ATGGTAGTAACAATCGATCGTTCTTACACGATTACCCCCTCAGATTCCTCTTCCACTACAATAATCCCTTTGTCACACTGTGATCAAACCAAGCTTCCAAACCATGGATCCCAACTTTCTCTCTACACCACTTCTAATTCCTCTTCTTCAACGGAAAATTTCAGAGCCTCACTCAGCAAAGCCTTGAATCTCTACTACCCTTTAGCCGGTAGACTCAGATGGATCCATGGCGGTCGATTACAACTTCTCTGCAACTCAAAGGGCGTCACACTATTGGAAGCCACGTGTCACGATAATCAGACAACCTTGGACATGCTTCTCGAAAACCTTGATAACAATGTTTTGTTGGAACAGTTTTTGCCCAAGGTTGACTATAGCGTTGACCGTATTGACGACATGCCGTTGATGGCGGCACAATTCACGAGGCTTCCGGGCAACGGCGTCGTTTTGGGGATGATTATTTGTCGTGCTGTGGTTGACGGAGCGGCTCTTGGGAATTTCATGACTTCATGGTCAAAATTGGCGAGAGGTGAAGATTTGGATTCGAGTTTGGTTCCGTTTTATGATCGAGGGCTGTTGGATTCGCTTGGTGTGAGTGTGGGTCCAAGATTTGAACATGCTGAATTTCTAACACCGCCACTTTGGGAAGAACAAAAAGAAGAAGAACCACAAGAGATTGAGCTTGCTACTGTTGTGTTGAAGCTCACCAAAGGCCAAGTTGAGATGCTTAAGAAGAAAGCTTATCATGATGGGGTTAAAGATGGCTTTGGCAATGGTTCAAACTCATCAAATACACTTTCTTCAAGTAGGCCTTACACTAGTTTTGAGGTCATAAGTGGTCACTTATGGAGGTGTATTTGCAAGGTGAAGAATGAGGGTAATTGGGGCCAGAAAACAAGGGTATGTGCGTTGGTCAATTGCAGGAACAGATTTAAACCAAATCTTCCTCAAAGTTATTTTGGGAATGCAACATTTCCTACCGTGACACCAACATGTTGCTTCGATGATATTGTTCACAAGCCTCTAGGCTATGCCGTTCAGAACGTGAGGAAAGCGATTGAGCGAATGAATGATGAGTATGTAAGGTCTGCCATTGCTTACATTGCTAATCAGAAGGACATGAATTCATTGAGGCAGAAGTTGTATAATCTTGGAGGAGGAAAATCCAGGGTGAACCCGAATATGTATATTGTGAGTTGGGCTAACTTTCCTTTTTATGAAGCGGATTTCGGGTGGGGAAAGCCGGTTTGTTTGGTTCCGGGAAGCATAAATTCGGATGGGAAGGTTTTCATTATGAACAATGGAAGTGGTGATGGCTTCATTGTTGCTACTTGCTTGCAACAATCCCTTGTGGATGATCTGAAGAAGCTCTTTTATGAGGATATAGAGGAGGTATATCCTAACTCTAAATTGTGA 1416 0.435 MVVTIDRSYTITPSDSSSTTIIPLSHCDQTKLPNHGSQLSLYTTSNSSSSTENFRASLSKALNLYYPLAGRLRWIHGGRLQLLCNSKGVTLLEATCHDNQTTLDMLLENLDNNVLLEQFLPKVDYSVDRIDDMPLMAAQFTRLPGNGVVLGMIICRAVVDGAALGNFMTSWSKLARGEDLDSSLVPFYDRGLLDSLGVSVGPRFEHAEFLTPPLWEEQKEEEPQEIELATVVLKLTKGQVEMLKKKAYHDGVKDGFGNGSNSSNTLSSSRPYTSFEVISGHLWRCICKVKNEGNWGQKTRVCALVNCRNRFKPNLPQSYFGNATFPTVTPTCCFDDIVHKPLGYAVQNVRKAIERMNDEYVRSAIAYIANQKDMNSLRQKLYNLGGGKSRVNPNMYIVSWANFPFYEADFGWGKPVCLVPGSINSDGKVFIMNNGSGDGFIVATCLQQSLVDDLKKLFYEDIEEVYPNSKL* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1899 471 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 8 464 - -
Ahy6g1899 471 SUPERFAMILY CoA-dependent acyltransferases 20 188 - -
Ahy6g1899 471 Gene3D - 1 210 IPR023213 -
Ahy6g1899 471 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 464 - -
Ahy6g1899 471 Pfam Transferase family 2 458 - -
Ahy6g1899 471 Gene3D - 214 460 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1899 Ahy-Chr6 93172328 93174738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1899 1 460 Monolignol Biosynthesis Gene Families AT5G48930 31.897 2.26e-68 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1899 K13065 - gmx:100819383 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2230 16 123877948 123880491 Ahy6g1899 6 93172328 93174738 hybridization