Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1891 AGGGGGAATTGTGTCTTATTCCCAACAGCTACTGCAACTGACTTCGTTGTTGGTGATAATGACGGATGGAAACTTGATTATAATTACACAAAATGGGCCCAAGATAAAGTTTTCCATGTTGGTGATGTCCTTGTGTTCAAATACAACAATGACAGCCACAATGTGCTGAAAGTGAATGCAACATCTTTCAAGGACTGTGTCACCTCTGATCCACTGGAAACATTCCGAAGCGGCCATGATTGGATCTCCCTTCAAAGCCCGGGAAAGAAGTGGTACATCTGCGGCATTGCAGGCCATTGTGCTGACCACCAAATGAAGCTTGTCATCAACGTCCTCGCCGACGGTCCCGCCCCCGCTCCTACTTCTTCTTCTCACTCTCTTGTCTCCTCTCTTGCCGTGATGGTCGCAGCGGCCATGATTGGCGTTGCGGCCATCTTCGCCTAG 444 0.491 RGNCVLFPTATATDFVVGDNDGWKLDYNYTKWAQDKVFHVGDVLVFKYNNDSHNVLKVNATSFKDCVTSDPLETFRSGHDWISLQSPGKKWYICGIAGHCADHQMKLVINVLADGPAPAPTSSSHSLVSSLAVMVAAAMIGVAAIFA* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1891 147 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 9 142 - -
Ahy6g1891 147 CDD Phytocyanin 13 111 - -
Ahy6g1891 147 Gene3D - 11 115 IPR008972 -
Ahy6g1891 147 Pfam Plastocyanin-like domain 25 102 IPR003245 GO:0009055
Ahy6g1891 147 PANTHER BLUE COPPER PROTEIN 9 142 IPR039391 GO:0009055
Ahy6g1891 147 ProSiteProfiles Phytocyanin domain profile. 13 113 IPR003245 GO:0009055
Ahy6g1891 147 SUPERFAMILY Cupredoxins 12 112 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1891 Ahy-Chr6 92819434 92821173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1891 5 146 Miscellaneous Gene Families AT5G26330 32.941 2.42e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1891 - - gmx:100806565 149.828
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2210 16 122919314 122921292 Ahy6g1891 6 92819434 92821173 hybridization