Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1872 ATGGACTCTGTGTGTTCTGAATTTCAAGGGAAACTCAACATCCTTGATATTGAGGAAGAATCAGTGGGTGTTAAAAAGGCATGTCCAACACGAGATATTAAGAGAAGTCGTTCAGCCGAAGTACATAATCTATCTGAAAGGGCGAGTGAAGACCGTATGCCAATTAGGCGAAGAGACAGGATCAATGAGAAGATGCGTGCATTGCAAGATCTCATACCAAACTGCAATAAGGTTCGCTTGTTTATACTTTCAAACCTTGAGCCATATTTGCTTCTCCTTGAGCCGAAAATGCAACCAGAGAAACAGAGAAATGAAACAAAGAGGCAGGAAGCATGGCAAGTATATGGGGCCTTGTTGTGTGCTGTTGGGCAATGTATGCATGAAAAGGCCAAAATCTTCAGCAATTTGCTCTCTCCAACACGTGCTTCTTCTAGACCCAAAGCCATGATTGCTATGTCAAATGAGTTTGGATAA 474 0.4219 MDSVCSEFQGKLNILDIEEESVGVKKACPTRDIKRSRSAEVHNLSERASEDRMPIRRRDRINEKMRALQDLIPNCNKVRLFILSNLEPYLLLLEPKMQPEKQRNETKRQEAWQVYGALLCAVGQCMHEKAKIFSNLLSPTRASSRPKAMIAMSNEFG* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1872 157 PANTHER TRANSCRIPTION FACTOR PIF3 16 78 IPR044273 GO:0003700|GO:0006355
Ahy6g1872 157 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 41 113 IPR036638 GO:0046983
Ahy6g1872 157 PANTHER TRANSCRIPTION FACTOR PIF3 16 78 - -
Ahy6g1872 157 Gene3D - 32 103 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1872 Ahy-Chr6 91851498 91856335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1872 16 98 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 57.955 3.05e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1872 - - ahf:112696927 297.745