Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1861 ATGTCTGAGCGACAAGGTGTTGGTGATCATGGCACCAATTCAGGAACACGGCGAAAAGGTGCGGCCACAAAGCGTGCCATGGCAGTGGCAGCAGCAGCAACAGTGCCTCCATGTGGGGCATGCAAGTTCTTGAGGAGGAAGTGCATCAGCGGCTGCATCTTTGCGCCCCATTTTGGCTCCGACCAAGGCGCAGCTCGCTTCGCAGCCGTGCACAAGGTGTTTGGTGCAAGCAACGTGTCGAAACTGTTGTTGCATATTCCGGTGAACCGCCGCCATGAGGCGGTGGTTACCATATCCTATGAGGCACAGGCAAGGCTGTCTGATCCGGTGTATGGTTGTGTGTCGACCATTCTTGCTTTGCAACAACAGGTGGCATCATTGCAAGGGGAGCTTTCTATGGTGCAAAATCAGCTGATAAATTCTAGGTTTGCATATGCAAATGTTCTTCATCAGTGCACACAACAGCATCATCATCATCATCATCATGATAATAATCAGCCAAACATGATCAATGTATCTTTATTACAACAACCAGCATACTCCAACAATAATTCATCTGCTTCAACCAATAATAACCTTGTGAACATGAACACCTTCAATAATAATAATAATAATAACCATTCAGGTTTCGAGCTTGCAATGGAGGCGGCACCATCATCACCACCCCACAGCTTTGAGCCTCTTCGGTTGTCACGGGAAAATAATGACGAGGATGATGAGGAAGAGAGCATCATTATTCCACAACTATTCAACCATGAGATAGTGCTTCACCGTCAATGA 780 0.4705 MSERQGVGDHGTNSGTRRKGAATKRAMAVAAAATVPPCGACKFLRRKCISGCIFAPHFGSDQGAARFAAVHKVFGASNVSKLLLHIPVNRRHEAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQGELSMVQNQLINSRFAYANVLHQCTQQHHHHHHHDNNQPNMINVSLLQQPAYSNNNSSASTNNNLVNMNTFNNNNNNNHSGFELAMEAAPSSPPHSFEPLRLSRENNDEDDEEESIIIPQLFNHEIVLHRQ* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1861 259 MobiDBLite consensus disorder prediction 1 19 - -
Ahy6g1861 259 Pfam Lateral organ boundaries (LOB) domain 37 135 IPR004883 -
Ahy6g1861 259 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 242 - -
Ahy6g1861 259 MobiDBLite consensus disorder prediction 1 21 - -
Ahy6g1861 259 MobiDBLite consensus disorder prediction 215 238 - -
Ahy6g1861 259 ProSiteProfiles LOB domain profile. 36 138 IPR004883 -
Ahy6g1861 259 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 5 242 - -
Ahy6g1861 259 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1861 Ahy-Chr6 91189260 91190887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1861 37 243 AS2 family AT3G03760 62.857 1.47e-76 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy6g1861 LOB 6.10E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1861 - - ahf:112698228 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2167 16 120700728 120702293 Ahy6g1861 6 91189260 91190887 hybridization