Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1848 GCTTCGAAACCACCGTCGCCGGCCTCGCCTTCTGCCTCCGTCGCGCAGCCACTGTCTCGACGGTGCCAGTTCTGTTCCATCGCGTCAGCCCTTCGGTCGTGCCCTGTTCCTTTCTTGCTACTGATCTGCTCTGCTCTGTTCTGGCATTTAGTTCTAGGGAAATTGATTATCATCGCTAACAACTGCCCACCATTGAGGAAGTCAGAAATAGAGTACTATGCCATGTTGGCAAAGGTTGGAGTCCATCATTACGATGGGAACAATGTCGACTTGGGCACTGCATGTGGAAAATATTACAGAGTGTGCTGCCTCAGCATTATTGATCCTGGTGATTCTGATATCATTAAGACACTGCCTGGCGAACAGTAA 369 0.5014 ASKPPSPASPSASVAQPLSRRCQFCSIASALRSCPVPFLLLICSALFWHLVLGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYDGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPGEQ* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1848 122 PANTHER RIBOSOMAL PROTEIN L30 53 122 IPR039109 GO:0003723
Ahy6g1848 122 PANTHER 60S RIBOSOMAL PROTEIN L30 53 122 - -
Ahy6g1848 122 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 54 115 IPR004038 -
Ahy6g1848 122 Gene3D - 50 118 IPR029064 -
Ahy6g1848 122 ProSitePatterns Ribosomal protein L30e signature 2. 90 110 IPR022991 -
Ahy6g1848 122 SUPERFAMILY L30e-like 54 116 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1848 Ahy-Chr6 90925626 90928090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1848 53 122 Cytoplasmic Ribosomal Protein Gene Family AT3G18740 85.714 1.73e-43 136