Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1840 ATGGCAAAATTCAGAAAATCAATCACTCCTTTTCTCAACATATCCTTCTTATTCCTCCTAGTATTCCTTGTAATAAAACCTTCAAACATTCATTACAATTCCAAAAGTGCCCCAGCCATCAAGAACAGAAGATTCAACCATGCAAGGCTACTAAGTAGTGACATGAGTGTGGAAGGCTGCACAGACCTGCATAAATTCTCCGATGACGCCGCGAAATGCTACTACGTCCAAACCCACGAAGATTGCAGATCAAAGGGTTACATAAACTACCTTCAAATCTTCTATTGCAGCCTGGGAAACTCCCCTGTTCTCGGCCACACACTACTAATCATGTGGCTCTCGGTGCTCTTCTACCTGCTCGGCGACACGGCTTCCAACTACTTCTGCAACAATTTGGAAGGGTTGTCGAAAATCTTAAGACTATCACCAACCATTGCAGGGGTCACCCTTCTCTCGCTAGGGAACGGTGCCCCCGATTTCTTCGCCAGCGTCGTCTCCTTCACCAAAACAAGCGATGGTGCTGTTGGTCTCAACAGCATTCTTGGTGGTGCTTTCTTTGTCTCAAGTGCTGTTATGGGAATCATAAGCATTCTTGTGAGCACAAAAGAGGTTGCGGTTGATAAAGCAAGTTTCATTAGAGATGTTATTTTCTTCCTTTTCTCACTCTTTGTCCTCTTAATCATCATCTCCATTGGGAAACTCTCCCTGTTGGGCTCAATCTGCTATGTTTCTATATATTTTCTTTATGTTTGTGCTGTTTCTGCCACACATTTTATCTATGGAGATGATAAACAAGAAGCTGGAGAATTTGCGGTTGTGTCCTCATCGGATGAATCGCTTGAATCTGGGATTCCGTTGTTAGGTTATGTTGATGATGAAAAACCAAACCACTTAGAGAAAGTTGTTGAAGAAACCAATCATGAAGAGCAACGACCAACTTTTGATATTTTGAAACATGCGGAGAATAGGATATTTGATTGGAATAACTTGGGGAAGTTTCTACAAATTGTAGAGTTGCCACTTTCTCTACCAAGAAGGCTTACAATTCCAGTTGTGAATGATGAGAAGTGGTCCAAGCCATATGCAGTTATATCGGTGACGCTGGCACCAGTTTTGTTGGCAACAGTTTACAACACCCAAAAGGAGAATGTGAGTTCAAGGAGCAGCTTAGTTACCTATTTAACCTCTTCATTAGTTGGAATAATTTTAGGTAACATGGCATGTGTGACCACAAAGAGTTGTAGCCCACCAAGGAGATGCTTGTTCCCTTGGTTATCTGGTGGATTTGTAATGAGTGTAACTTGGACTTATCTAATTGCTGAGGAGCTTGTTTCACTATTGGTCTCAATTGGCAACATAATTGGGGTTAGCCCTTCAATTTTAGGGTTAACTGTCCTAGCTTGGGGTAATTCCCTAGGTGATTTGATAGCAAATGGTGCCATGGCTATGAATGGTGGGCCAGATGGGGCCCAAATGGCTATTTCTGGATGCTATGCTGGGCCTATGTTTAATACCTTAATGGGCTTGGGCTTGCCCCTTGTTCTCTCAGCATTGAATGATTACCCTGATCCTTATGTTATTCCTAAGGATACTTCATTGTATCAAACAATACTGTTCTTGATGGGAGGGGTTCTTTGGGCCCTTGTGATTTTGCCAAAGAAGAACATGAAGCTTGATAAATCCTTGGGGGTAGGACTTGTGACTATATACCTTTGCTTCTTGTTTATAAGGATGGCCATGGCTATTGGCGACTTGGCGTAG 1761 0.4253 MAKFRKSITPFLNISFLFLLVFLVIKPSNIHYNSKSAPAIKNRRFNHARLLSSDMSVEGCTDLHKFSDDAAKCYYVQTHEDCRSKGYINYLQIFYCSLGNSPVLGHTLLIMWLSVLFYLLGDTASNYFCNNLEGLSKILRLSPTIAGVTLLSLGNGAPDFFASVVSFTKTSDGAVGLNSILGGAFFVSSAVMGIISILVSTKEVAVDKASFIRDVIFFLFSLFVLLIIISIGKLSLLGSICYVSIYFLYVCAVSATHFIYGDDKQEAGEFAVVSSSDESLESGIPLLGYVDDEKPNHLEKVVEETNHEEQRPTFDILKHAENRIFDWNNLGKFLQIVELPLSLPRRLTIPVVNDEKWSKPYAVISVTLAPVLLATVYNTQKENVSSRSSLVTYLTSSLVGIILGNMACVTTKSCSPPRRCLFPWLSGGFVMSVTWTYLIAEELVSLLVSIGNIIGVSPSILGLTVLAWGNSLGDLIANGAMAMNGGPDGAQMAISGCYAGPMFNTLMGLGLPLVLSALNDYPDPYVIPKDTSLYQTILFLMGGVLWALVILPKKNMKLDKSLGVGLVTIYLCFLFIRMAMAIGDLA* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1840 586 Gene3D - 361 580 IPR044880 -
Ahy6g1840 586 Gene3D - 141 272 IPR044880 -
Ahy6g1840 586 PANTHER CATION/CALCIUM EXCHANGER 1 7 583 - -
Ahy6g1840 586 Pfam Sodium/calcium exchanger protein 111 252 IPR004837 GO:0016021|GO:0055085
Ahy6g1840 586 Pfam Sodium/calcium exchanger protein 427 577 IPR004837 GO:0016021|GO:0055085
Ahy6g1840 586 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 7 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1840 Ahy-Chr6 90558199 90560945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1840 31 585 Antiporters AT5G17860 49.644 7.61e-180 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1840 K13754 - gmx:100818583 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2138 16 119638116 119640504 Ahy6g1840 6 90558199 90560945 hybridization