Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1826 ATGGAAGAGCAAGGGCAGCAACACCATCAAGACCCAAACAGGAGCCATAGCCATGGTGCTGGTGGTTCTTCCTCTTCCTCTGAGAAGCAGAGTAGCGAACCGGTGCGCTCAAGATGGACGCCCAAACCGGAGCAAATACTTATTCTTGAATCCATCTTCAACAGCGGCATGGTTAACCCTCCAAAGGACGAGACCGTCAGGATAAGGAAGCTTCTAGAGAAGTTTGGCGCTGTCGGCGACGCTAACGTTTTCTACTGGTTCCAGAACCGTAGGTCCAGATCTCGTCGCCGACAGCGCCAGATTCAGCAGCAGCAACAACAGCAGCAACAACACCACCAACACCAGCTCGGTGTTGGTGTTGTTGGGGTTGGTGTTGGTGGTGCAATTCAGTGTGATCAGGATCACCCTGGTCAACCTGCACTCTCAGTAGGGAGTTCTTTGGGTTTCGGAGGTTCTTCTTCTTTCGGAGATTCTTCTTCTTGTTCTTTTCATCTTCCTCCTCCTCCGACTGGTGCCGTTGGCGGTTCTTCTTCTTCTTCATCTTCCTTCGGTGGTGAGCAAGAAGCCATGGATAACTTCTTCTCTGGTGTTCCTCCTCCTCATCATCATACTCCTCAAATGGGGTTCCAGGAATTTGATCACACTTCATCTTTGTTCCCTCATGTTCCACCAAATTTCACCTACAACTCCGGATTCATCACAGTGTTCATCAATGGAATTGCAACAGAAGTTCCAAGAGGTCTTATAGACATCAAAACATTGTTTGGTGAAGATGCAATTTTAGTTCATTCTTCTGGAGTGCCACTTCCAACCAATGAGTTTGGCTTCTTAATGCAGACCTTGCAGCATGGTGAAAGCTACTTTCTGGTTCCAAAGCCAACATAA 885 0.4814 MEEQGQQHHQDPNRSHSHGAGGSSSSSEKQSSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQIQQQQQQQQQHHQHQLGVGVVGVGVGGAIQCDQDHPGQPALSVGSSLGFGGSSSFGDSSSCSFHLPPPPTGAVGGSSSSSSSFGGEQEAMDNFFSGVPPPHHHTPQMGFQEFDHTSSLFPHVPPNFTYNSGFITVFINGIATEVPRGLIDIKTLFGEDAILVHSSGVPLPTNEFGFLMQTLQHGESYFLVPKPT* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1826 294 MobiDBLite consensus disorder prediction 172 188 - -
Ahy6g1826 294 MobiDBLite consensus disorder prediction 1 15 - -
Ahy6g1826 294 MobiDBLite consensus disorder prediction 1 42 - -
Ahy6g1826 294 SUPERFAMILY Homeodomain-like 32 102 IPR009057 -
Ahy6g1826 294 PANTHER WUSCHEL-RELATED HOMEOBOX 11 7 292 IPR044558 GO:0003700|GO:0048830
Ahy6g1826 294 MobiDBLite consensus disorder prediction 95 114 - -
Ahy6g1826 294 Gene3D - 22 115 - -
Ahy6g1826 294 MobiDBLite consensus disorder prediction 158 206 - -
Ahy6g1826 294 MobiDBLite consensus disorder prediction 16 38 - -
Ahy6g1826 294 Pfam Homeodomain 36 96 IPR001356 GO:0003677
Ahy6g1826 294 ProSiteProfiles 'Homeobox' domain profile. 32 97 IPR001356 GO:0003677
Ahy6g1826 294 SMART HOX_1 34 101 IPR001356 GO:0003677
Ahy6g1826 294 MobiDBLite consensus disorder prediction 99 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1826 Ahy-Chr6 89060088 89063338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1826 10 290 Wox Gene Family AT3G03660 52.083 3.70e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Ahy6g1826 Homeodomain 1.30E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1826 - - adu:107494279 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2119 16 118175798 118179008 Ahy6g1826 6 89060088 89063338 hybridization