Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1730 ATGCTTACAACTGAATGGAGTCTATTTGTCAGTAGAAAGAAGCTCTTTGCTGGAGACTCTGTTTTATTTATACGAGATGAAAAGCAACAGCTTCTTTTGGGCATTAGGCTAGCTAACAGGCAACCAGCCAACATATCATCCTCGGTATTGTCAAGCGATAGTATGCATATTGGGATTCTTGCGGCAGCTGCTCATGCCGCTGCAAATAATAGTCCCTTTACCGTCTTTTACAATCCTAGGGCTAGTCCTTCAGAGTTTGTTATTCCTTTAGCCAAGTACTACAAGGCAGTGTTTCTATTCTCCTTTTCAGAATTTGTGAGATGGAAAAATTCACAATGGTGTAATTTGCAGTCGATAACAAGATTTACTGCAGAAGGAATAGGATCCGTGTGTGGAAGGTTATCTATTGGGACTGCTGAAAAGATTCCAGAATCAGAGATTATTGGTACAACTGATGCCAGGACGCATTTGTTGGAGCTATTTTATACGCTATATGTGCCAACTTTGATCCAATGGCAATGTTGTCATTTGCTTCTTATGTGGTAA 546 0.4029 MLTTEWSLFVSRKKLFAGDSVLFIRDEKQQLLLGIRLANRQPANISSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVFLFSFSEFVRWKNSQWCNLQSITRFTAEGIGSVCGRLSIGTAEKIPESEIIGTTDARTHLLELFYTLYVPTLIQWQCCHLLLMW* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1730 181 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 98 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ahy6g1730 181 Gene3D - 1 37 IPR015300 -
Ahy6g1730 181 Pfam Auxin response factor 63 97 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Ahy6g1730 181 ProSiteProfiles B3 DNA-binding domain profile. 1 39 IPR003340 GO:0003677
Ahy6g1730 181 SUPERFAMILY DNA-binding pseudobarrel domain 2 66 IPR015300 -
Ahy6g1730 181 PANTHER AUXIN RESPONSE FACTOR 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1730 Ahy-Chr6 83596844 83600169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1730 1 97 B3 DNA Binding Superfamily AT1G19850 72.165 1.36e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1730 - - adu:107494169 361.688