Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1697 ATGTCTGCGAACCAGCCACAGCTCAATGGAGCCTACTACGGCCCCGCCATCCCCCCTTCTAAATCCTACCACCGTCCGGGACGCGGCGGTGGCGGTCTCCTCGGCTGCTGCTGCGGCTGCATCTTCAGCCTCATCTTCAAGCTTATCCTCAGCATCGTCATCATCATCGGCATCGCCATCTTCATCTTCTGGCTCATCGTTCGCCCCAACGTCGTTAAGGTCCACGTCACCGACGCGTCCCTTACCCAATTCAACTACAGCGGCAACACCTTAAATTACAATCTTGCCCTCAACTTCTCCATCCGAAACCCAAACAAGAAGCTCGGCATCTACTACGACTATATCGAAGCCAGAGCGCTGTTTCAGGATTCTAGGTTTGACTCTGACCTCTTGCCTACCTTCTACCAGGGGCACAAGAACACTACCGTGCTGGCCCACGTGTTCGAGGGCCAGCAGGTGGTGCCTCTTAGCACCGACCAGGTTTCCGAGCTAAACAAGGAGAAAAGCAAAGGAGTTTATGATATCCGAGTGAAATTGTATTTGAAGGTGAGATTTAAGCTTGGTGCAATCAAGACCAAGAAGGTCAAGCCAAGGGTTACCTGCGACTTGCAGGTACCTTTGACTTCTTCCAAAGGTGTTTCCTCTTCTGATATCTTTCAGACCACCAAGTGCGATTGGAGTCGCTGA 687 0.5211 MSANQPQLNGAYYGPAIPPSKSYHRPGRGGGGLLGCCCGCIFSLIFKLILSIVIIIGIAIFIFWLIVRPNVVKVHVTDASLTQFNYSGNTLNYNLALNFSIRNPNKKLGIYYDYIEARALFQDSRFDSDLLPTFYQGHKNTTVLAHVFEGQQVVPLSTDQVSELNKEKSKGVYDIRVKLYLKVRFKLGAIKTKKVKPRVTCDLQVPLTSSKGVSSSDIFQTTKCDWSR* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1697 228 PANTHER OS05G0367900 PROTEIN 30 226 IPR044839 GO:0098542
Ahy6g1697 228 Pfam Late embryogenesis abundant protein 99 201 IPR004864 -
Ahy6g1697 228 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 30 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1697 Ahy-Chr6 80044407 80045613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1697 66 208 SNARE and Associated Proteins AT1G32270 40.972 1.11e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1697 - - gmx:100793187 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy6g1697 6 80044407 80045613 Ahy12g2884 12 118582848 118583868 PCT
Ahy6g1697 6 80044407 80045613 Ahy2g2471 2 100984923 100985943 PCT
Ahy12g2884 12 118582848 118583868 Ahy6g1697 6 80044407 80045613 PCT
Ahy2g2471 2 100984923 100985943 Ahy6g1697 6 80044407 80045613 PCT