Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1670 ATGTCGATGGACAAAGCAATTTGTGAAGAAGCATCGTACAACACTGCATATGATGATCATGATCAGTATAATTCTTGCGACGTTACTGTTCCATCACTTAGTGAAGATGACACACAACATGTGGATAAAGAAATTTGTGGGAAAGAGTCTGTAAACGTTATTCAAGTAGAGGACGATGCAATAACAGTGAATCATGAGTTACCCGATCACACTGGAATTTCAATAGATGAAATTTCGTATGTAGGATTGAGATTTATTTCCTTGCAGCGGGCACAAGAGTTTTATTATAATTACAAAAATAAAGTTGGCTTCGTGACTAGGATTAGGAATACCAACTTTGACAATACCAGGGAGGATTCAAAGATACCCATTAACCAATCATTACACTGTAGTCGTGAAGGTTATCGGGAGTCTCGAGTGAAGGTAGCAACTCGGGTAAAGAGAATAACAATAGTCGGATGCGAAGTAAGGATGTACGTGATGCTTGATAGGCAGAATGATAATTGGATGGTCTCCAAACTAGAACTGAAGCACACCCACCCGTGTTCTGCCAAGCAAGCTGTGTATTACACTGAGTACAGGGAACTGACCATGCATGCCAAGTGTGTGATTCAGAACAACGATGAGGCTGTCATACGGCCCAACAAGACTTATCTCGCACTGGCAAATGAGGTTGGTGGCTCGTCGAATTTGGGTTACTCAGAAAAGGATGTGAGGAATTACATTACGAGCAATCTGCGCTGTGCTGACGGAAACACAGATGTGAAGGAAATGATTAGCTATTTCATGCGAATGAACGATATCAACCCGAATTTGTTTTATGCAGTGGATGTAGACGAAGCTAACAAGTTTAAAAGTGCACTCTGGGTAGATACAGGATGCAGGGCTTCCTATGAATATTATGGTGACGTGGTATCGTTTGATATAACGTATAGTAAAAACAAGCACGGACTTCCATTTGCATCTTTTGTTGGTGTCAACCATCACAGCAAGTCCACTCTACTCAGATGTACTTTGCTGGGAAATGAGGAAATTCGTAGCTTCGAGTAG 1050 0.4133 MSMDKAICEEASYNTAYDDHDQYNSCDVTVPSLSEDDTQHVDKEICGKESVNVIQVEDDAITVNHELPDHTGISIDEISYVGLRFISLQRAQEFYYNYKNKVGFVTRIRNTNFDNTREDSKIPINQSLHCSREGYRESRVKVATRVKRITIVGCEVRMYVMLDRQNDNWMVSKLELKHTHPCSAKQAVYYTEYRELTMHAKCVIQNNDEAVIRPNKTYLALANEVGGSSNLGYSEKDVRNYITSNLRCADGNTDVKEMISYFMRMNDINPNLFYAVDVDEANKFKSALWVDTGCRASYEYYGDVVSFDITYSKNKHGLPFASFVGVNHHSKSTLLRCTLLGNEEIRSFE* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1670 349 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 39 348 - -
Ahy6g1670 349 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 348 IPR031052 GO:0006355
Ahy6g1670 349 Pfam FAR1 DNA-binding domain 93 182 IPR004330 -
Ahy6g1670 349 Pfam MULE transposase domain 304 349 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1670 Ahy-Chr6 76146823 76148434 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy6g1670 FAR1 2.80E-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1670 - - ahf:112805632 716.842