Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1669 ATGGTTGAGATAATGAAAAAGATACCGCATAAGCTCGGAGGATATGCTCGGTACAGAGAAATAGATGATAGAATGCATGGCACTGTTTGGAATTCCAGGTTTGTGGAATCTTTCGAGAAGGATTGGTTTGCATTCATTGTTGACTTTAACTTAGAGCGAAACAGATGGCTATCAGGGAAAGAGTCTGTAAACGTTATTCAAGTAGAGGACGATGCAATAACAGTGAATCATGAGTTACCCGATCACACTGGAATTTCAATAGATGAAATTTCGTATGTAGGATTGAGATTTATTTCCTTGCAGCGGGCACAAGAGTTTTATTATAATTACAAAAATAAAGTTGGCTTCGTGACTAGGATTAGGAATACCAACTTTGACAATACCAGGGAGGATTCAAAGATACCCATTAACCAATCATTACACTGTAGTCGTGAATGTTATCGGGAGTCTCGAGTGAAGGTAGCAACTCGGGTAAAGAGAATAACAATAGTCGGATGCGAAGTAAGGATGTACGTGATGCTTGATAGGCAGAATGATAATTGGATGGTCTCCAAACTAGAACTGAAGCACACCCACCCGTGTTCTGCCAAGCAAGCTGTGTATTACACTGAGTACAGGGAACTGACCATGCATGCCAAGTGTGTGATTCAGAACAACGATGAGGCTGTCATACGGCCCAACAAGACTTATCTCGCACTGGCAAATGAGGTTGGTGGCTCGTCGAATTTGGGTTACTCAGAAAAGGATGTGAGGAATTACATTACGAGCAATCTGCGCTGTGCTGACGGAAACACAGATGTGAAGGAAATGATTAGCTATTTCATGCGAATGAACGATATCAACCCGAATTTGTTTTATGCAGTGGATGTAGACGAAGCTAACAAGTTTAAAAGTGCACTCTGGGTAGATACAGGATGCAGGGCTTCCTATGAATATTATGGTGACGTGGTATCGTTTGATATAACGTATAGTAAAAACAAGCACGGACTTCCATTTGCATCTTTTGTTGGTGTCAACCATCACAGCAAGTCCACTCTACTCAGATGTACTTTGCTGGGAAATGAGGAAATTCGTAGCTTCGAGTAG 1086 0.4153 MVEIMKKIPHKLGGYARYREIDDRMHGTVWNSRFVESFEKDWFAFIVDFNLERNRWLSGKESVNVIQVEDDAITVNHELPDHTGISIDEISYVGLRFISLQRAQEFYYNYKNKVGFVTRIRNTNFDNTREDSKIPINQSLHCSRECYRESRVKVATRVKRITIVGCEVRMYVMLDRQNDNWMVSKLELKHTHPCSAKQAVYYTEYRELTMHAKCVIQNNDEAVIRPNKTYLALANEVGGSSNLGYSEKDVRNYITSNLRCADGNTDVKEMISYFMRMNDINPNLFYAVDVDEANKFKSALWVDTGCRASYEYYGDVVSFDITYSKNKHGLPFASFVGVNHHSKSTLLRCTLLGNEEIRSFE* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1669 361 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 89 360 - -
Ahy6g1669 361 Pfam MULE transposase domain 316 361 IPR018289 -
Ahy6g1669 361 Pfam FAR1 DNA-binding domain 105 194 IPR004330 -
Ahy6g1669 361 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 360 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1669 Ahy-Chr6 76144015 76146811 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy6g1669 FAR1 1.50E-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1669 - - ahf:112805632 616.69