Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1655 ATGGAAAACATGCCACCAGGTTATCGTTTCTACCCTACGGAAGAGGAGCTGATTTCATTCTATCTACGGAACAAGCTTGAAGGAGTGAGGGAGGACATGAATCGGGTTATTCCAGTTCTTGATATATATGAATATAGTCCAAGCGAACTCCCACAAATATCGGGAGAGGCGAGTGTTAGAGACAGCGAGCAGTGGTTCTTTTTCATTCCGCGGCAAGAAAGCGAAGCGCGTGGAGGGAGGCCGAAGAGGCTCACAACAACTGGGTACTGGAAAGCCACTGGCTCCCCTAACCATGTTTTCTCTTCCGATAATCGCGTCATCGGAATGAAGAGAACCATGGTTTTCTACTGCGGTAGAGCTCCTAACGGAACTAAAACCGATTGGAAGATGAATGAGTATAAAGCCATTGACACTCATCACCCTTCTTCTTCCTCCAACAACAGGGCGGTTCCTATGTTAAGGCAAGAATTCAGTTTATGCCGAGTGTACAAGAAAGCAAAATGTTTGAGGGCATTTGATAGAAGACCACCTCCAAGGAGGGACACGTATCCTCCTAGCCAGAACAACGGTTCATCATCTTTTGATCATCATCATCAACATAATCAAACGGTGGAGAAATCTTCAGGTGCAGGTAGCTCACCGGAGAGTTCGTGCTCCGAAGACCACGGACAGTGTTCTCATCGGACGGAGGATGTGGAAAACGCTAACGAGCCATTTCTCGATTGGGAGCAAATCGATTGGTTCTTAGGATCTTCACTGCCGGAACCATGA 771 0.4721 MENMPPGYRFYPTEEELISFYLRNKLEGVREDMNRVIPVLDIYEYSPSELPQISGEASVRDSEQWFFFIPRQESEARGGRPKRLTTTGYWKATGSPNHVFSSDNRVIGMKRTMVFYCGRAPNGTKTDWKMNEYKAIDTHHPSSSSNNRAVPMLRQEFSLCRVYKKAKCLRAFDRRPPPRRDTYPPSQNNGSSSFDHHHQHNQTVEKSSGAGSSPESSCSEDHGQCSHRTEDVENANEPFLDWEQIDWFLGSSLPEP* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1655 256 Gene3D NAC domain 13 169 IPR036093 GO:0003677|GO:0006355
Ahy6g1655 256 MobiDBLite consensus disorder prediction 171 238 - -
Ahy6g1655 256 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 247 - -
Ahy6g1655 256 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Ahy6g1655 256 MobiDBLite consensus disorder prediction 204 220 - -
Ahy6g1655 256 ProSiteProfiles NAC domain profile. 4 165 IPR003441 GO:0003677|GO:0006355
Ahy6g1655 256 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 247 - -
Ahy6g1655 256 SUPERFAMILY NAC domain 2 165 IPR036093 GO:0003677|GO:0006355
Ahy6g1655 256 MobiDBLite consensus disorder prediction 221 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1655 Ahy-Chr6 75207198 75208932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1655 7 247 NAC Transcription Factor Family AT5G22380 53.279 3.04e-82 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy6g1655 NAM 8.30E-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1655 - - gmx:100777948 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1909 16 100258811 100260716 Ahy6g1655 6 75207198 75208932 hybridization