Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1634 ATGAACCCGCGCTCCCTATTCTATTCTTCTTCTTCTTCTTCTCATTTTTGCGTTCCGCTCTGTTTTGCAGCAACCAAGCCATTCACGCAAGAACTCTTGCAGTTTTATGTTGGAAGGAGGGTTCGGGCTGTGATGCAGGTTGTGCGATCCGAGGGGGGCGTTGTCATTGGAAAATCAACAGATGAGAAGCAGCTAGTTGTGAAAGGACCACCCCCACCTGCACCTCTTACAAATTTTGTTGAAGTTATTGGCATTGTTGACAATGATAGATCCATTCGAGCTGAGATATGGACCAATTTTGGCAATGTGATTGATATGTTCAGCTACAATAAGCTTTGTCAGCTTGCAAATGGAGAATTTAAGCACTTGTTTGTGTGA 378 0.4392 MNPRSLFYSSSSSSHFCVPLCFAATKPFTQELLQFYVGRRVRAVMQVVRSEGGVVIGKSTDEKQLVVKGPPPPAPLTNFVEVIGIVDNDRSIRAEIWTNFGNVIDMFSYNKLCQLANGEFKHLFV* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1634 125 CDD RPA3 31 124 - -
Ahy6g1634 125 Gene3D - 25 125 IPR012340 -
Ahy6g1634 125 Pfam Replication factor A protein 3 30 121 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy6g1634 125 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 30 125 - -
Ahy6g1634 125 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 30 125 - -
Ahy6g1634 125 SUPERFAMILY Nucleic acid-binding proteins 31 124 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1634 Ahy-Chr6 72947124 72949887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1634 32 125 Core DNA Replication Machinery Family AT4G18590 62.766 5.95e-42 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1634 K10740 - gmx:100306641 158.688