Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1610 ATGATGGACTTATCACTACACAAGCAACTCTTCCCCCTCCTCTCTCTTCTCTTAATTCTATTTCTTTCAGGACAAAGGATGCAAGCAGAGGCTAATAATAGCCTTCAAAATCCCCAACTCTGTGAACCAACCAAGAAACTCTTCGTTTTTGGAGACTCATATGCTGACACCGGCAACATCAGAAAAAGTCTCTCCAATTCATGGAAAGACCCCTACGGCATCACCTTTCCCGGCAAGCCAGCCGGTCGATTCTCCGACGGAAGGGTCCTCACCGACTACATTGCTAAGTACCTGGGAGTGAAAACACCTGTGCCATACAGATTTCGGAAGCAAATGGCGCAGCAGCTGAAGTACGGCATGAACTTTGCAGTGGGTGGAACTGGCGTATTTGACACGTCTACTCCAGGGCCCAACATGACCACACAGATCCAATTGTTGGAGCAACTCATCCACGACGGACTCTACACCGCTTCTGATCTAACCAACTCCATCGCTCTTGTCTCTGTTGCTGGTAACGACTATAGTCACTACCTTGCCACTCATGCCTCTCCTCAGGGTCTACCATATTTCGTGGCGTCAGTGGTGAATCAAACAACAAGGAATCTGATGCGGATCAAAGCATTGGGGGTAAAGAAGATCATAGTTGGCAGCCTCCAACCCCTTGGATGCCTCCCTCAGGTCACAGCCTTCTCGTCCTTCCAACAATGCAACGCCTCTTCCAACACCTTGGTGGCTTTCCACAACAACCTCTTGAACCAAGCAGTTACCAATTTGAACCAATCGTGGTCGTCGTCCTTCGCGGTTCTCAACCTCTACGACAGCTTCATGTCCGTCCTAAACCACCCTACGACGCACAACATCCAGAACCAGTTGCGGCCGTGCTGCGTTGGCGTAAACAGCAAGTATTCATGTGGGAGTGTGGATGAGAATAACGTGAAGATGTATAGGGTTTGCGACGATCCCAAATCAGCCTTCTTTTGGGATCTGGTGCACCCCACGCAGGCCGGGTGGCATGCCGTGTATAACAAGTTAAGAACCATGAATGCTCTTCAAGGAATTCAGTTCTAG 1068 0.4953 MMDLSLHKQLFPLLSLLLILFLSGQRMQAEANNSLQNPQLCEPTKKLFVFGDSYADTGNIRKSLSNSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLGVKTPVPYRFRKQMAQQLKYGMNFAVGGTGVFDTSTPGPNMTTQIQLLEQLIHDGLYTASDLTNSIALVSVAGNDYSHYLATHASPQGLPYFVASVVNQTTRNLMRIKALGVKKIIVGSLQPLGCLPQVTAFSSFQQCNASSNTLVAFHNNLLNQAVTNLNQSWSSSFAVLNLYDSFMSVLNHPTTHNIQNQLRPCCVGVNSKYSCGSVDENNVKMYRVCDDPKSAFFWDLVHPTQAGWHAVYNKLRTMNALQGIQF* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1610 355 Pfam GDSL-like Lipase/Acylhydrolase 47 343 IPR001087 GO:0016788
Ahy6g1610 355 SUPERFAMILY SGNH hydrolase 44 344 - -
Ahy6g1610 355 CDD SGNH_plant_lipase_like 47 344 IPR035669 -
Ahy6g1610 355 Gene3D SGNH hydrolase 39 351 IPR036514 -
Ahy6g1610 355 PANTHER OSJNBB0059K02.9 PROTEIN 6 354 - -
Ahy6g1610 355 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1610 Ahy-Chr6 68853419 68860264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1610 13 340 Pollen Coat Proteome AT1G75930 26.496 1.30e-27 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1850 16 95431142 95444238 Ahy6g1610 6 68853419 68860264 hybridization
Ahy6g1610 6 68853419 68860264 Ahy12g2958 12 119200746 119205562 PCT
Ahy6g1610 6 68853419 68860264 Ahy2g2543 2 101602821 101607637 PCT