Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1597 ATGGACTTCCATTATCTGAAGCAATGGAGAAACCAGGATGAGTCAGAGGAACAACAACATTCTACAAAGATGCCAAAACTTCTCCCACCAGAATCCCATCAACAACAGCCACCATCACCTGCCTCTGCTCTCCCCTTGTTTGTACCTGAACCCAACAGCAAAGTCACCTGCACCCTGTCAGATTCAACACTTGCTCCTCATACTACTACTACTACCACCAAATTCCCCAGAATGGGGAGTTACTTCAGCTTGTCACAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATATTCAGGTACATGTTGGCCGGTGCTGCTGTTCCCCCTGAGCTCCTTCAACCAATCAAGAAAAGCCTCTTCCATTCTTCTCCCTATTTCCTTCACCACTCTCTCCAACACTATCAACCTGCAGCTCTGTTGCAATCAGGGTACTGGGGAAGAGCATCAATGGATCCGGAGCCAGGGCGGTGCCGGAGGACTGACGGGAAGAAGTGGCGGTGCTCGAGGGACGTGGTGGCCGGTCAGAAGTACTGCGAGCGCCACATGCATAGAGGTCGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCAACCACTGGTGGTGGAACTACTTTAGGCGTTGTTTCATCATCTTCTTGTATCTCTTCACCGCCTCTTGCCACTGCCTCATTGAAATCCCCCTTTGATCTCCTTCACCTTAATAATGAACGGTCCTCTGGGAGTGGAGGGACCAAGGAAGAAGAAAACAAGAGGGTGTTTGAAAATCAAGATAACCATCATCATGTGGGTGGGGATGGTGGCAGATCAGGTGGGCACATGCTGAGGCATTTCTTTGATGACTGGCCACGTTCACTGCATCAGGACCCTGAAAACGCTGAAAACAATGGTGGTGGTGGTGGGAGTGGGAGGATGAACTCGGCCACATCACTCTCAATTTCAATGCCTGGAAATAATGCTGCTTCTTCGGATGTATCACTAAAGTTGTCCACTGGGTATGGGGAGGATCCGTGTCCAAGAAATGGGAATGGGAATGCAGAGGCAGAGCAACTGCAGTTGAGTTGGGCCGGAGGCTGGAGTTCGGGGAATCAAGTGGCTTCAATGGGAGGACCACTTGCTGAGGCACTCAGATCATCCACTTCCACTTCATCTCCCACCAGTGTTCTGCATCACTTGCCTCGTGCTGCTGCCTCTCAGACCAGCTTCATTAGCACCTAG 1215 0.5095 MDFHYLKQWRNQDESEEQQHSTKMPKLLPPESHQQQPPSPASALPLFVPEPNSKVTCTLSDSTLAPHTTTTTTKFPRMGSYFSLSQWQELELQALIFRYMLAGAAVPPELLQPIKKSLFHSSPYFLHHSLQHYQPAALLQSGYWGRASMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPTTGGGTTLGVVSSSSCISSPPLATASLKSPFDLLHLNNERSSGSGGTKEEENKRVFENQDNHHHVGGDGGRSGGHMLRHFFDDWPRSLHQDPENAENNGGGGGSGRMNSATSLSISMPGNNAASSDVSLKLSTGYGEDPCPRNGNGNAEAEQLQLSWAGGWSSGNQVASMGGPLAEALRSSTSTSSPTSVLHHLPRAAASQTSFIST* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1597 404 Pfam WRC 151 193 IPR014977 -
Ahy6g1597 404 ProSiteProfiles QLQ domain profile. 81 116 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy6g1597 404 SMART QLQ_2 80 116 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy6g1597 404 PANTHER GROWTH-REGULATING FACTOR 3 10 404 - -
Ahy6g1597 404 MobiDBLite consensus disorder prediction 1 47 - -
Ahy6g1597 404 Pfam QLQ 82 114 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy6g1597 404 MobiDBLite consensus disorder prediction 298 322 - -
Ahy6g1597 404 MobiDBLite consensus disorder prediction 1 21 - -
Ahy6g1597 404 MobiDBLite consensus disorder prediction 282 322 - -
Ahy6g1597 404 ProSiteProfiles WRC domain profile. 150 194 IPR014977 -
Ahy6g1597 404 MobiDBLite consensus disorder prediction 184 210 - -
Ahy6g1597 404 PANTHER - 10 404 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1597 Ahy-Chr6 66976033 66978947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1597 1 391 GRF Transcription Factor Family AT2G36400 49.766 1.85e-96 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Ahy6g1597 WRC 2.60E-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1597 - - aip:107648821 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1838 16 94528147 94531103 Ahy6g1597 6 66976033 66978947 hybridization