Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1577 ATGGAAATGGAGGATCATCATCATCAACACCAACAGTATGGCGGCATCACTGATCTGAGGCAGCTTGTGAGTAACAACGGACCCCGTTCAACACATTTTCCTACTTCCATACCGCCACAGCCCACGGCGGAGCTCTTCCCGGGCCACCCAAACCTCGCGGCTGCGCATCAGCAGCAGCACTACGAGCTGATGATGTTTGGGCGCCAAGTAGCTGACTTAATGCCTCGCTGTCTCCACGACTTTGCTGACGCCAGCAATAATAACACAAGCAGCATAGGTGTTGCCACTGTCACTACTCCCACCACAACCACAAGCGCTTCAACTCCTCCTCTTAGTGGGTTGGGCGGCGCTGAGGCTGCAGGATGCTTAGGTGGAGACGCATCCACTGGAAGATGGCCTAGACAAGAGACTCTTACTCTTCTTGAGATCAGATCTCGCCTTGACCCCAAATTCAAAGAAGCTAATCAGAAAGGTCCCCTCTGGGATGAAGTTTCTAGGATCATGTCTGAAGAGCATGGATACCAAAGGAGTGGGAAAAAGTGCAGGGAGAAGTTTGAGAATCTGTACAAGTATTACAAGAAGACAAAGGAAGGAAAAGCTGGAAGACAAGACGGGAAGCATTACCGATTCTTTCGCCAACTCGAAGCCTTATACGGTGAAAACAACAGTAACAACAGCAACGCTGCCTCAGCACAAGAAACCAATTTTGGTGGTAGCAACACCCTCCATTACCAAAACAATCCTCATGCTTTCAATTCCCAACATCAGATGAATAACCAAGAAATGCTGCTTCTTGGTTCCCAGAACAGCCTAAGCCTCACCAACTCCACTGAGTTTGAAACCTCTTCTTCGGATGATGATGATCACAATAGCACTGGGGGAGTGAAAGGGAACGATGAGTCCATGGAGAAGAGGAGGAAGAAGAGAGGAGGGAGCAAGAGCTGGAAGGTAAAGATAAAAGACTTCATTGACTTGCAAATGAGGAAGCTTGTGCAGAAGCAAGAAGAGTGGCTTGACAAGCTTATGAAGACGCTGGAACAGAAGGAGAAAGAGAGGGTTCTGAGAGAGGAAGAGTGGAGGAGACAAGAGGCAGCCAGGTTGGAGAGGGAGCACAAGTTTTGGGCCAAAGAGAGAGCATGGATTGAAGCAAGGGATGCTGCTTTAATGGAGGCCTTGCACAAGCTGACAGGAACTGATCAGGTAAAGTCTCATCATCATCATCATGATGGGATAATAACTGGTTCCGCAATGCAAAATAAGGACCATAACGAAGATGATGAAAACTGGCAAGAATGTGAGATATCAAGGCTTGTACAGTTGAGAGCTGAGATGATGGAAACAAGGTTTAGGCATGGTGGTGATGGTTGTTCAGAAGAGGCTTTCTGGGAACAGATAGCAACAAAAATGGCATGTTTTGGGTATGAAAGGAGTCCAGTAAAGTTGAGAGAGAAATGGGAAACAATCAGCAAAGAAAACAACAAGAAGAAGCGGAAGGAGAATAACTCAAACTCAGTACGAAGTAGTAGTTCTTGTTTTTACATTGAAAACAATAACAATGACCATTATTCTTCTTCTTCTTCTCTATATAACAACAACAACAACAACCAAAGTGGTGGTGGATATTGTGATATCAACAATGATCAAAGGCGGCAACAACAATCACCTTCGAATTCCAACGCTAATGCATCAGTTCATCAAGCTGAGAACTGTTTCCCATTCTTGATGAGTTGTGAGGGAGGAACTTTGTGGGACAACTACAGCTTAAAGGTTAATAAACCAAATCAAAATGAGTAG 1794 0.4554 MEMEDHHHQHQQYGGITDLRQLVSNNGPRSTHFPTSIPPQPTAELFPGHPNLAAAHQQQHYELMMFGRQVADLMPRCLHDFADASNNNTSSIGVATVTTPTTTTSASTPPLSGLGGAEAAGCLGGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENNSNNSNAASAQETNFGGSNTLHYQNNPHAFNSQHQMNNQEMLLLGSQNSLSLTNSTEFETSSSDDDDHNSTGGVKGNDESMEKRRKKRGGSKSWKVKIKDFIDLQMRKLVQKQEEWLDKLMKTLEQKEKERVLREEEWRRQEAARLEREHKFWAKERAWIEARDAALMEALHKLTGTDQVKSHHHHHDGIITGSAMQNKDHNEDDENWQECEISRLVQLRAEMMETRFRHGGDGCSEEAFWEQIATKMACFGYERSPVKLREKWETISKENNKKKRKENNSNSVRSSSSCFYIENNNNDHYSSSSSLYNNNNNNQSGGGYCDINNDQRRQQQSPSNSNANASVHQAENCFPFLMSCEGGTLWDNYSLKVNKPNQNE* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1577 597 Pfam Myb/SANT-like DNA-binding domain 427 512 IPR044822 -
Ahy6g1577 597 Pfam Myb/SANT-like DNA-binding domain 131 217 IPR044822 -
Ahy6g1577 597 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 28 578 - -
Ahy6g1577 597 MobiDBLite consensus disorder prediction 274 312 - -
Ahy6g1577 597 ProSiteProfiles Myb-like domain profile. 124 189 IPR001005 -
Ahy6g1577 597 Gene3D - 132 194 - -
Ahy6g1577 597 Gene3D - 429 494 - -
Ahy6g1577 597 MobiDBLite consensus disorder prediction 282 307 - -
Ahy6g1577 597 SMART sant 128 191 IPR001005 -
Ahy6g1577 597 SMART sant 425 491 IPR001005 -
Ahy6g1577 597 MobiDBLite consensus disorder prediction 222 252 - -
Ahy6g1577 597 MobiDBLite consensus disorder prediction 537 561 - -
Ahy6g1577 597 Coils Coil 331 358 - -
Ahy6g1577 597 PANTHER - 28 578 - -
Ahy6g1577 597 CDD GT1 427 488 - -
Ahy6g1577 597 CDD GT1 131 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1577 Ahy-Chr6 62672906 62676104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1577 9 592 Trihelix Transcription Factor Family AT5G03680 42.812 8.13e-126 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy6g1577 Myb_DNA-bind_4 3.40E-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1577 - - aip:110263365 768.074