Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1573 ATGTCGTTGTCGAAGAGTGCAATGGATGTTGACTCGGAACCACTCAGTTCACAAGACAACGTCGAAGATCCCATGATGACTAGTGTGGAAGAAAATGTTAACTGCACTTGTGATTGTGGTGGCAGCAGTAGTAAGTGTGTGACTGTGACGGCCGATGATATTATAAACCAGACTTTTGAAACATCAGATGCAGCTTATAACTTGTATGTACGTTATGCGAGGTGTCTCGGGTTTGGAGTTCGCAAGGGTGATACAGCACGTGGAAAAGATGGAACACAGCGCAGAAGGAGGTTTTTTTGCAGCAAGGAAGGAAAGAGAGCCGAGAAATACATATCTAGTTTGAGTAGGAAGCGGGAGCATAGAGCGCTGACTCGCACTGGTTGTGAAGCCATGCTTGCGGTGTATCTTGACACTAAAACTTCGACTTGGAGGGTTAAAAAATTAGTTGAGAAGCACAACCACGATCTTGTCCCACAATGCTTGGTACACCTAATTCCAAACCACCGAGGGTTGACTGAGCCACAAAAAGCTCAGGCGAATACCATGCATGATCATGGTCTTCCAACCTCTAAAATAATGGGACTAATGGTAGGCCAAGCCGGTGGTTATGCCAATGTCGGGTTCACAAAGAAGGACCTAGATAATCACTTTCAAAGAGCTCGTCGTGCAATGCTCATTGGTGGGGATTCCAATGCGACGATTAGCTATCTACTTGGGAAAGCAGATGTCGACCCGATGGCCATGACAAGGTACAGTGCTACTGATGAAGGTCGGCTGGCAAATTTATTTTGGGCAGATGGCATTTGTAGGTCCGATTATCAGTGCTTTGGAGATGTGCTTGCATTCGATACAACCTACCGGAAGAATAAGTACAGAAGGCCCTTGGTAATCTTCTCAGGTTGTAACCATCATCGCCAAACATGTATATTTGGTTTTTCCTTGGTAGAGGACGAACGGACTGCAACATATACGTGGTTGTTGCAAAACTTTCTAGAAGTCATGCTGAACAAGTCTCCTAGTGTTGTGGTCACAGACGGTGATGAAGCAATGAAGGCAGCAATTCGAGAAATCTTCCCAGATGCAACTCACCGATTATGTGGTTGGCACATTCAGAAGAATGTAACGGCAAACATAAAAAACAAAAATTTTTCCAACGACTTCAGAAGATGTTTGTATGCTCCATGGCATCCGGAAGAATTTGAAGAATATTGGGAGAATATGATAAAAAAATATGGGTTGGAGGAAAATGAATGGGTTCTGAGTGAATATGAGAAGAGGAAAAGTTGGGCAAGCGCTTACTTGAGGGATAAATTCTGTGCTGGATTTAGAACAACATCAAGGTGTGAGGCGATAAACAACTTCATTAAGAGGTTTATTGGCATTCGCCAAAGTCTTCTAGAGTTGGTCCAAAATCTTGAACATGCTCTTAGGGACTATAGAAACAATGAATTAGTTTCTCAATTTAAGACGCTGTATGGGGAGCCCGTTCTAACTACTGGGCTAGAAGCGTTGGAGCTTTCTGCTGCCAATTTTTACACTAGGGAGATTCTTGGAGATGTAAAAAAGGAGATTCAAGGAGTAGTCGCATTAGATGTAATAAATGAGGAAAACATATCAACCACTGTTGTGTTAAAAGTTAAGGAGTGTGACAGGAGACAACATACTTATAACGTACTTTACGATCGCAATACTGAGCATATGGAGTGTGAATGTAGTCGGTGGAGTAGTGAAGGCATTCCTTGCAGGCACATGTTTTGTGCAATGAAAAGGGTAGGTTTACAGAAGTTGCCAGATAGTCTTCTTTTGAGAAGATGGTCGAAGGATGCCAAGAAGTATCTGGATGAAAGTTCTGCTGGAGGCACTACGCAAGACAGAGAAAGAGAATTTTTGATGCGCTATGGCGCATTGTCAGTGGCAGCTACGTGGATGGTATTCTTAGGAGCTCAAGATGGTCCTTCTTTCCATGACACTATGAATGAAGTATATCGTTGGACCCAAACACTAGAACAAAAATCTGACTTGAAAAGATAA 2031 0.4293 MSLSKSAMDVDSEPLSSQDNVEDPMMTSVEENVNCTCDCGGSSSKCVTVTADDIINQTFETSDAAYNLYVRYARCLGFGVRKGDTARGKDGTQRRRRFFCSKEGKRAEKYISSLSRKREHRALTRTGCEAMLAVYLDTKTSTWRVKKLVEKHNHDLVPQCLVHLIPNHRGLTEPQKAQANTMHDHGLPTSKIMGLMVGQAGGYANVGFTKKDLDNHFQRARRAMLIGGDSNATISYLLGKADVDPMAMTRYSATDEGRLANLFWADGICRSDYQCFGDVLAFDTTYRKNKYRRPLVIFSGCNHHRQTCIFGFSLVEDERTATYTWLLQNFLEVMLNKSPSVVVTDGDEAMKAAIREIFPDATHRLCGWHIQKNVTANIKNKNFSNDFRRCLYAPWHPEEFEEYWENMIKKYGLEENEWVLSEYEKRKSWASAYLRDKFCAGFRTTSRCEAINNFIKRFIGIRQSLLELVQNLEHALRDYRNNELVSQFKTLYGEPVLTTGLEALELSAANFYTREILGDVKKEIQGVVALDVINEENISTTVVLKVKECDRRQHTYNVLYDRNTEHMECECSRWSSEGIPCRHMFCAMKRVGLQKLPDSLLLRRWSKDAKKYLDESSAGGTTQDREREFLMRYGALSVAATWMVFLGAQDGPSFHDTMNEVYRWTQTLEQKSDLKR* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1573 676 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 625 IPR031052 GO:0006355
Ahy6g1573 676 Pfam MULE transposase domain 279 373 IPR018289 -
Ahy6g1573 676 SMART 26again6 567 594 IPR006564 GO:0008270
Ahy6g1573 676 Coils Coil 462 482 - -
Ahy6g1573 676 MobiDBLite consensus disorder prediction 1 23 - -
Ahy6g1573 676 ProSiteProfiles Zinc finger SWIM-type profile. 556 592 IPR007527 GO:0008270
Ahy6g1573 676 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 57 625 - -
Ahy6g1573 676 Pfam FAR1 DNA-binding domain 68 158 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1573 Ahy-Chr6 61963649 61970727 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy6g1573 MULE 1.20E-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1573 - - ahf:112717474 1370.53