Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1572 ATGGGAAATTTCTTGTTAGTTTATGAATACATGGATAATGGGAGTTTGGATAAGAGAGTGTTTTGTGATGAGAGCATGATGCTGAACTGTGAAGAGAGAATAAGAAATATCAAAGGTGTGGCCTTTGCTGTGTTGTATTTGCATGAAGGTTGGGAAGAACAAGTTCTGCATAGGGACATCAAAGCCAGCAATGTGTTACTTGATAAGGATATGAATGGAAAGCTTGGAGACTTTGGATTAGCAAGAATGCATAGCCATGGCCAAGTTGCTAGCACAAGAAAGTTGGTTGGAACAGTTGGTTACATGGCTCCAGAAGTGATCAAGACCGGACAAGCCTTGACTCGCACGGATGTGTTCATGTTTGGAATCTTGATTTTAGAGGTCATGTGTGGAAGGAGGCCTATGGAAGAAGGTAAGCCACCTCTTGTGGAGTTTGTGTGGGGACTAATGGTTAAAGGGGAACTAATGAATGCACTTGATGAGAGGTTAAGTGCTAAAGGAGACTTCAATCTGCAACAAGTTGAGAAGGTTCTTCAGTTGGGATTGTTGTGTGCATACCCTGAACCAAAATCAAGACCAAACATGAGACAAGTTGTGAGTATTTTAGAAGGGAACAATGAGGGAGGAGAAGAATCAGAGAATGAGAATGCGGATACTTGTTTGCTTCTAAAGTTGAAATCTGGGGATATTTTTTCTGAGTATTCTAATTATTTTAGCTATTCAACACACCCAACATTTGAAGATATTCGCCAGTCTAATACTTCTTCAATGTCTCTTACTTGGTCTAAATCTGTAGTTGAGTGTAGATGA 810 0.4012 MGNFLLVYEYMDNGSLDKRVFCDESMMLNCEERIRNIKGVAFAVLYLHEGWEEQVLHRDIKASNVLLDKDMNGKLGDFGLARMHSHGQVASTRKLVGTVGYMAPEVIKTGQALTRTDVFMFGILILEVMCGRRPMEEGKPPLVEFVWGLMVKGELMNALDERLSAKGDFNLQQVEKVLQLGLLCAYPEPKSRPNMRQVVSILEGNNEGGEESENENADTCLLLKLKSGDIFSEYSNYFSYSTHPTFEDIRQSNTSSMSLTWSKSVVECR* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1572 269 SMART serkin_6 2 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g1572 269 Gene3D Transferase(Phosphotransferase) domain 1 11 227 - -
Ahy6g1572 269 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g1572 269 SUPERFAMILY Protein kinase-like (PK-like) 3 203 IPR011009 -
Ahy6g1572 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 55 67 IPR008271 GO:0004672|GO:0006468
Ahy6g1572 269 PANTHER - 3 262 - -
Ahy6g1572 269 Pfam Protein kinase domain 3 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g1572 269 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 3 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1572 Ahy-Chr6 61951630 61953319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1572 1 150 Receptor kinase-like Gene Family AT4G04960 65.789 2.11e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy6g1572 Pkinase 1.60E-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1572 - - ahf:112696640 532.332