Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1547 ATGTCCATAAAGGAGGATGATGTTAATAATGATTCTGATAATGATTTGGGTGTTAATTTCGATTATCAACCGAATGCAGAAGATGATGCTGATGACGACGATGTGGATTCTCTGGATTCCACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTAGAGGATATTTGGAACCTGGAGTTTAGGACGGAGGATGAGGCTTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAAGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTGATATGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGATAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATCTGATACCGGCCAATCGTCGTCTCACTGTGACTGATAGAGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGAGCTGCCATATTATGGGGTATATTGCATTCCAGAAGGGTGGATATCGTCATGCTGGCTTCACACGGAAAGATTTGTACAACCACATCGATCGCTATCGTCGGGCAAAAGTTAAAAACGGGGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCACTGTTCTTTGGAAAGTATACGTTCACTAGTGACAAAAGGCTGGAGCATATTTTTTGGGCAGATGGGCAGTCAATTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCTGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGGCCTACTATCCGATGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGCGATGGGTGGGAAAAGTCCAAAAGCAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTGCCTGATGGTCTTATATACGACAACAACGACCAGAGAGACTTTGATCGGAGAAGGACAGCCATTTTGGATAAGCACAACCTTGTTGGCAGTACCTGGATGGAGAAGACGTACGAAACTCGTGAGATGTGGTCCCATTGTTTCCTCTGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGTGAAGGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCTTTAAAGGAGTATAGAAACAAAGAATTAATAGCTGACTTTAAGTCTCAGTGCTCAGAGCCTGTGATGATTACCTCATTGGAGGTATATGAAAGATCTGCATCATGTTATTTCATGCGAAACGTTTTCAAAGAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAACGGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGTGTGACTGCTTTGGGAGACCCGGCCAAAGATCGCCGGGTGGAAGTCGATAGAGGTAAGAATCTGTTCTCGTGCTCGTGCAAGCTGTTTGAATCACGTGGTATTCCCTGTAGTCATATCTTCTGTGCCATGAAGTTCGAAAACATACTTGAGTTTCCAGATTCGTTGATATACAAAAGGTGGACAAAGAATGCAAAGAACGAATTTATTAGCACAGATATGCCTGTGAATGATGACATCGAAAGGGTCTTAAAGTTTCAAGTTGGAGCGTTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATCTTGCAGACTTTGATGAAGTCCAGTCTGAACTTGTCAATTTAGTTATCCGCCTGCAGTCACGCAAACAAGGCAAGTCAACTCCTAATGTTAACGTGGAAGGCAGCAACGATCCATTCGTTGTCAAAAGCAAAGGAGCCCCTTCCAAGAGGTCTTCTTGGAGGAAGAAGAGAGCATGCTCTAATTGCCACAAGTACGGTCATTACTACAAGCGCTGTCCAGATCTGATGCAGCATAGTGTGGAAGGTAACCCTCGCGATCGATCATACGGCAATGCATCAGCCAAGGACTCAGGTTTTAGTCCAGAAAGGTTTGCTAATTCTTCAAGGTCGTTCTCAATTAAGTCCGAACACCACTCAGGACCTAATACCAAGCCTTTTAAAAAGGGTGGAACAAGGAAGTTTACGGCGACGGGTATGAGGAACCGGAAGGGTAAAGACAACACTTTTGTTGAGGTGAAGGAGTCACAGCAGGACAAGAGACATTCATTCAAGAACTATGAATGCGTTAATGATGTCGTTGATGATAAATGTGACACACGACATGTGCAGATCGATGTCCGAGATCCGTTAACATCGTCACTGCCTTGTGGCAACAAACAAGGATCGTACATGGCATTGTTCGCGTCGATGCACAGGACACTTTGA 2529 0.435 MSIKEDDVNNDSDNDLGVNFDYQPNAEDDADDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMKKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDMDDRSREARSLTRTKCPARLRIKLDYGCGRWKVSCFVESHNHDLTPPQFAHLIPANRRLTVTDRVQVENLHNFGVKSCHIMGYIAFQKGGYRHAGFTRKDLYNHIDRYRRAKVKNGDANAAINYLIGKSNNDPLFFGKYTFTSDKRLEHIFWADGQSIIDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTETYKWLLETFVEAMGGKSPKAVITDGDLAMRDAIKNVLPDGLIYDNNDQRDFDRRRTAILDKHNLVGSTWMEKTYETREMWSHCFLWDKFFGYIRTTSQCEGINSLIRFYVNRKNTLIDFMHNLDRALKEYRNKELIADFKSQCSEPVMITSLEVYERSASCYFMRNVFKEIRNEIQRAGALNITVLSTTLDKVEFSVTALGDPAKDRRVEVDRGKNLFSCSCKLFESRGIPCSHIFCAMKFENILEFPDSLIYKRWTKNAKNEFISTDMPVNDDIERVLKFQVGALASNCNKLCDIACKDLADFDEVQSELVNLVIRLQSRKQGKSTPNVNVEGSNDPFVVKSKGAPSKRSSWRKKRACSNCHKYGHYYKRCPDLMQHSVEGNPRDRSYGNASAKDSGFSPERFANSSRSFSIKSEHHSGPNTKPFKKGGTRKFTATGMRNRKGKDNTFVEVKESQQDKRHSFKNYECVNDVVDDKCDTRHVQIDVRDPLTSSLPCGNKQGSYMALFASMHRTL* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1547 842 ProSiteProfiles Zinc finger CCHC-type profile. 687 702 IPR001878 GO:0003676|GO:0008270
Ahy6g1547 842 MobiDBLite consensus disorder prediction 653 675 - -
Ahy6g1547 842 MobiDBLite consensus disorder prediction 728 747 - -
Ahy6g1547 842 MobiDBLite consensus disorder prediction 25 39 - -
Ahy6g1547 842 MobiDBLite consensus disorder prediction 1 42 - -
Ahy6g1547 842 PANTHER OS02G0262500 PROTEIN 60 367 - -
Ahy6g1547 842 PANTHER OS02G0262500 PROTEIN 369 686 - -
Ahy6g1547 842 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 369 686 IPR031052 GO:0006355
Ahy6g1547 842 SUPERFAMILY Retrovirus zinc finger-like domains 673 705 IPR036875 GO:0003676|GO:0008270
Ahy6g1547 842 SMART 26again6 546 573 IPR006564 GO:0008270
Ahy6g1547 842 Pfam MULE transposase domain 286 367 IPR018289 -
Ahy6g1547 842 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
Ahy6g1547 842 MobiDBLite consensus disorder prediction 711 767 - -
Ahy6g1547 842 ProSiteProfiles Zinc finger SWIM-type profile. 535 571 IPR007527 GO:0008270
Ahy6g1547 842 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 367 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1547 Ahy-Chr6 56998346 57001349 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy6g1547 FAR1 9.90E-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1547 - - ahf:112755379 1635.54